RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	HMGCL	P35914	325 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	NEK3	P51956	506 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	ELP6	Q0PNE2	266 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	KYNU	Q16719	465 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	SKIDA1	Q1XH10	827 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	TMEM52B	Q4KMG9	183 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	ANKRD20A4	Q4UJ75	823 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	SPANXN3	Q5MJ09	141 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	TSTD2	Q5T7W7	516 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	ERAP2	Q6P179	960 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	ZNF449	Q6P9G9	518 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	FBXL19	Q6PCT2	694 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	CRTC1	Q6UUV9	634 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	CCDC25	Q86WR0	208 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	PALM2	Q8IXS6	379 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	GSPT2	Q8IYD1	628 aa	Known RBP	11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	AADAT	Q8N5Z0	425 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	PPHLN1	Q8NEY8	458 aa	Known RBP	11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	DTX3L	Q8TDB6	740 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	STYX	Q8WUJ0	223 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	ANKRD7	Q92527	254 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	SIPA1	Q96FS4	1042 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	SGSM3	Q96HU1	749 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	MRGPRX1	Q96LB2	322 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	SLC6A17	Q9H1V8	727 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	PABPC3	Q9H361	631 aa	Known RBP	11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	KDM4C	Q9H3R0	1056 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	ZFYVE1	Q9HBF4	777 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	PLAC1	Q9HBJ0	212 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	LRRC4C	Q9HCJ2	640 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	ARFGAP3	Q9NP61	516 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	PCDH12	Q9NPG4	1184 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	ITM2C	Q9NQX7	267 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	CHRAC1	Q9NRG0	131 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	TREX1	Q9NSU2	369 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	PIH1D1	Q9NWS0	290 aa	Known RBP	11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	SYBU	Q9NX95	663 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	MOCS1	Q9NZB8	636 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	NINJ2	Q9NZG7	142 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	ZC3H7B	Q9UGR2	993 aa	Known RBP	11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	FZD4	Q9ULV1	537 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	SPO11	Q9Y5K1	396 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	AKAP13	Q12802	2813 aa		11.31	□□□□□ -0.6
RAD51B-222	ENST00000555907	ZCWPW2	A0A1B0GU75	182 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	PSMD11	O00231	422 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	MID1	O15344	667 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	ZNF217	O75362	1048 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	IGLV3-19	P01714	112 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	DNTT	P04053	509 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	ADRB3	P13945	408 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	CTPS1	P17812	591 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	CSRP1	P21291	193 aa	Known RBP	11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	LPO	P22079	712 aa	Predicted RBP	11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	XPA	P23025	273 aa	Predicted RBP	11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	ABL2	P42684	1182 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	PTGER3	P43115	390 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	PSMD8	P48556	350 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	RPL6	Q02878	288 aa	Known RBP	11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	PTS	Q03393	145 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	CNTN1	Q12860	1018 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	POU6F1	Q14863	301 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	FASTKD3	Q14CZ7	662 aa	Known RBP	11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	PIP5KL1	Q5T9C9	394 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	NEK5	Q6P3R8	708 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	SLC36A4	Q6YBV0	504 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	UNC5A	Q6ZN44	842 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	C3orf62	Q6ZUJ4	267 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	NLRP8	Q86W28	1048 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	HDDC3	Q8N4P3	179 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	CHCHD4	Q8N4Q1	142 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	PAF1	Q8N7H5	531 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	OR2I1P	Q8NGU4	316 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	BLOC1S5	Q8TDH9	187 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	EID2B	Q96D98	161 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	C9orf72	Q96LT7	481 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	NUSAP1	Q9BXS6	441 aa	Known RBP	11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	EPB41L4B	Q9H329	900 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	SLC32A1	Q9H598	525 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	NLE1	Q9NVX2	485 aa	Predicted RBP	11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	IL17C	Q9P0M4	197 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	B4GALT6	Q9UBX8	382 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	CYP8B1	Q9UNU6	501 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	ZNF711	Q9Y462	761 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	MAD1L1	Q9Y6D9	718 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	SPEG	Q15772	3267 aa		11.3	□□□□□ -0.6
RAD51B-222	ENST00000555907	IGHV1OR15-9	A0A0B4J2B8	117 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	NPIPB15	A6NHN6	443 aa	Predicted RBP	11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	C10orf142	B7Z368	130 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907		H7C0S8	307 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	AURKA	O14965	403 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	SPINT1	O43278	529 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	RIPK2	O43353	540 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	TSPAN6	O43657	245 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	BANF1	O75531	89 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	ALPI	P09923	528 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	ENG	P17813	658 aa		11.29	□□□□□ -0.6
RAD51B-222	ENST00000555907	HSD17B3	P37058	310 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms