RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 GLYATL1P3A0A0U1RQE8 302 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 ZCWPW2A0A1B0GU75 182 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 A0A1W2PPC4 97 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 PRAMEF26H0Y7S4 382 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 TOR1BO14657 336 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 SLC31A1O15431 190 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 HRO43593 1189 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 BANF1O75531 89 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 SPAG6O75602 509 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 RHOBTB1O94844 696 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 SLC4A1P02730 911 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 IGHV4-34P06331 123 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 MYBL2P10244 700 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 HNRNPA2B1P22626 353 aaKnown RBP12.42□□□□□ -0.42
SHMT2-221ENST00000555773 CD27P26842 260 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 NMBRP28336 390 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 TEAD1P28347 426 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 AKT2P31751 481 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 PPP2CBP62714 309 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 PPP2CAP67775 309 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 PRAMEP78395 509 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 XIAPP98170 497 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 FGL2Q14314 439 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 PTPRCAPQ14761 206 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 ELF2Q15723 593 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 LONRF1Q17RB8 773 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 WSCD2Q2TBF2 565 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 MAP9Q49MG5 647 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 GPR33Q49SQ1 333 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 WDR45BQ5MNZ6 344 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 HP1BP3Q5SSJ5 553 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-221ENST00000555773 STEAP4Q687X5 459 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 KIAA0930Q6ICG6 404 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-221ENST00000555773 ZNF449Q6P9G9 518 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 EMBQ6PCB8 327 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 UNC5AQ6ZN44 842 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 C3orf62Q6ZUJ4 267 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 TRAM1L1Q8N609 369 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.42□□□□□ -0.42
SHMT2-221ENST00000555773 GABPB2Q8TAK5 448 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-221ENST00000555773 FAM174AQ8TBP5 190 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 HDAC10Q969S8 669 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 BIRC7Q96CA5 298 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 AP2M1Q96CW1 435 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 ZC3H10Q96K80 434 aaKnown RBP12.42□□□□□ -0.42
SHMT2-221ENST00000555773 TBATAQ96M53 351 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 ZSCAN5AQ9BUG6 496 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 SLC2A6Q9UGQ3 507 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 FKBPLQ9UIM3 349 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 COQ6Q9Y2Z9 468 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 HS3ST3A1Q9Y663 406 aa12.42□□□□□ -0.42
SHMT2-221ENST00000555773 DLL1O00548 723 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 LILRB5O75023 590 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 SRP72O76094 671 aaKnown RBP12.41□□□□□ -0.42
SHMT2-221ENST00000555773 VAPBO95292 243 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 FAM153BP0C7A2 387 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 BCKDHBP21953 392 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 MAT2AP31153 395 aaKnown RBP12.41□□□□□ -0.42
SHMT2-221ENST00000555773 TRIM23P36406 574 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 ARCN1P48444 511 aaKnown RBP12.41□□□□□ -0.42
SHMT2-221ENST00000555773 ARSDP51689 593 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 TMPRSS15P98073 1019 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 ITGA9Q13797 1035 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 CRYMQ14894 314 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 FASTKD3Q14CZ7 662 aaKnown RBP12.41□□□□□ -0.42
SHMT2-221ENST00000555773 BRD3Q15059 726 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 KYNUQ16719 465 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 FAM153CQ494X1 144 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 HENMT1Q5T8I9 393 aaKnown RBP12.41□□□□□ -0.42
SHMT2-221ENST00000555773 PNCKQ6P2M8 343 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 AFTPHQ6ULP2 937 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 CES3Q6UWW8 571 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 RFLNAQ6ZTI6 216 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 LMNTD2Q8IXW0 634 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 OR6P1Q8NGX9 317 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 OR4L1Q8NH43 312 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 GSDMBQ8TAX9 411 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 ZNF398Q8TD17 642 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 CALML6Q8TD86 181 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 SCG3Q8WXD2 468 aaKnown RBP12.41□□□□□ -0.42
SHMT2-221ENST00000555773 DNASE2BQ8WZ79 361 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 KLK6Q92876 244 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 SCAMP4Q969E2 229 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 ZNF669Q96BR6 464 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-221ENST00000555773 CFAP36Q96G28 342 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 C9orf72Q96LT7 481 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 FCRL3Q96P31 734 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-221ENST00000555773 KLF6Q99612 283 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-221ENST00000555773 TTC1Q99614 292 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 WDR83Q9BRX9 315 aaKnown RBP12.41□□□□□ -0.42
SHMT2-221ENST00000555773 RIOK2Q9BVS4 552 aaKnown RBP12.41□□□□□ -0.42
SHMT2-221ENST00000555773 TXLNGYQ9BZA5 131 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 IRF2BPLQ9H1B7 796 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 LRRC4CQ9HCJ2 640 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 MOCS1Q9NZB8 636 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 SLC30A1Q9Y6M5 507 aa12.41□□□□□ -0.42
SHMT2-221ENST00000555773 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 CCDC78A2IDD5 438 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 CCDC162PA2VCL2 907 aa12.4□□□□□ -0.42
SHMT2-221ENST00000555773 GOLGA8CPA6NN73 597 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms