RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 PIANPQ8IYJ0 282 aa10.18□□□□□ -0.78
SRP54-208ENST00000555557 HDDC3Q8N4P3 179 aa10.18□□□□□ -0.78
SRP54-208ENST00000555557 C2CD4AQ8NCU7 369 aaPredicted RBP10.18□□□□□ -0.78
SRP54-208ENST00000555557 ACVR1CQ8NER5 493 aa10.18□□□□□ -0.78
SRP54-208ENST00000555557 MZB1Q8WU39 189 aa10.18□□□□□ -0.78
SRP54-208ENST00000555557 NECAB3Q96P71 396 aaPredicted RBP10.18□□□□□ -0.78
SRP54-208ENST00000555557 ASB2Q96Q27 587 aa10.18□□□□□ -0.78
SRP54-208ENST00000555557 KLF6Q99612 283 aaPredicted RBP10.18□□□□□ -0.78
SRP54-208ENST00000555557 CPNE1Q99829 537 aa10.18□□□□□ -0.78
SRP54-208ENST00000555557 PPCSQ9HAB8 311 aa10.18□□□□□ -0.78
SRP54-208ENST00000555557 CATSPERZQ9NTU4 200 aa10.18□□□□□ -0.78
SRP54-208ENST00000555557 FBXO5Q9UKT4 447 aa10.18□□□□□ -0.78
SRP54-208ENST00000555557 COQ6Q9Y2Z9 468 aa10.18□□□□□ -0.78
SRP54-208ENST00000555557 KANSL1LA0AUZ9 987 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 TRIM49D1C9J1S8 452 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 GOLGA8RI6L899 631 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 STK25O00506 426 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 AREL1O15033 823 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 MMP20O60882 483 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 PRAMEF1O95521 474 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 ITGA2BP08514 1039 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 ELFN1P0C7U0 828 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 UGT1A6P19224 532 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 C5AR1P21730 350 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 UGT1A1P22309 533 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 UGT1A4P22310 534 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 FOXN2P32314 431 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 UGT1A3P35503 534 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 UGT1A5P35504 534 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 SPINT3P49223 89 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 LIG3P49916 1009 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 STC1P52823 247 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 STARD6P59095 220 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 FZD5Q13467 585 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 GAS6Q14393 721 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 RASA2Q15283 850 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 CHRNA6Q15825 494 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 CRY1Q16526 586 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 FASTKD1Q53R41 847 aaKnown RBP10.17□□□□□ -0.78
SRP54-208ENST00000555557 EOGTQ5NDL2 527 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 AGBL2Q5U5Z8 902 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 AGBL4Q5VU57 503 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 CNSTQ6PJW8 725 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 AFTPHQ6ULP2 937 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 EXOC3L1Q86VI1 746 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 SPNS2Q8IVW8 549 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 SRRM1Q8IYB3 904 aaKnown RBP10.17□□□□□ -0.78
SRP54-208ENST00000555557 GJD3Q8N144 294 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 RIBC1Q8N443 379 aaPredicted RBP10.17□□□□□ -0.78
SRP54-208ENST00000555557 CALML6Q8TD86 181 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 GANCQ8TET4 914 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 ATXN2LQ8WWM7 1075 aaKnown RBP10.17□□□□□ -0.78
SRP54-208ENST00000555557 SCAMP4Q969E2 229 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 TLCD1Q96CP7 247 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 SERAC1Q96JX3 654 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 OMDQ99983 421 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 FAM167BQ9BTA0 163 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 HDAC8Q9BY41 377 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 ABCG8Q9H221 673 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 LTB4R2Q9NPC1 389 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 CD93Q9NPY3 652 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 FBXL12Q9NXK8 326 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 ZNF180Q9UJW8 692 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 MMP17Q9ULZ9 603 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 CRYL1Q9Y2S2 319 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 MTO1Q9Y2Z2 717 aaKnown RBP10.17□□□□□ -0.78
SRP54-208ENST00000555557 GLYATL1P3A0A0U1RQE8 302 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 IQANK1A0A1B0GTG1 560 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 TCRBV21S2A2A0A5A6 115 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 H7C0S8 307 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 SRP72O76094 671 aaKnown RBP10.17□□□□□ -0.78
SRP54-208ENST00000555557 S1PR4O95977 384 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 ADH1BP00325 375 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 SNRPAP09012 282 aaKnown RBP10.17□□□□□ -0.78
SRP54-208ENST00000555557 ZNF30P17039 623 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 GM2AP17900 193 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 SAT1P21673 171 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 NFKBIAP25963 317 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 HPDP32754 393 aaPredicted RBP10.17□□□□□ -0.78
SRP54-208ENST00000555557 SPAM1P38567 509 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 TAS2R38P59533 333 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 NAB1Q13506 487 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 ACOX1Q15067 660 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 GRTP1Q5TC63 336 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 MRNIPQ6NTE8 343 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 TRIM67Q6ZTA4 783 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 TAS2R42Q7RTR8 314 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 TRABD2AQ86V40 505 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 ZC3HC1Q86WB0 502 aaKnown RBP10.17□□□□□ -0.78
SRP54-208ENST00000555557 C4orf33Q8N1A6 199 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 CBARPQ8N350 705 aaPredicted RBP10.17□□□□□ -0.78
SRP54-208ENST00000555557 NAT14Q8WUY8 206 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 CCDC97Q96F63 343 aaPredicted RBP10.17□□□□□ -0.78
SRP54-208ENST00000555557 SIPA1Q96FS4 1042 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 MRGPRX1Q96LB2 322 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 RBBP8Q99708 897 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 MCMBPQ9BTE3 642 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 ASB8Q9H765 288 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 FADS3Q9Y5Q0 445 aa10.17□□□□□ -0.78
SRP54-208ENST00000555557 SLC30A1Q9Y6M5 507 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms