RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 APOL6Q9BWW8 343 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 AP1M1Q9BXS5 423 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 HRH4Q9H3N8 390 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 TMEM51Q9NW97 253 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 CWC15Q9P013 229 aaKnown RBP5.44□□□□□ -1.54
VRK1-205ENST00000555402 MORF4L1Q9UBU8 362 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 CFDP1Q9UEE9 299 aaPredicted RBP5.44□□□□□ -1.54
VRK1-205ENST00000555402 HS3ST3B1Q9Y662 390 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 TTC3P53804 2025 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 EME2A4GXA9 379 aaPredicted RBP5.43□□□□□ -1.54
VRK1-205ENST00000555402 ITM2AO43736 263 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 JRKO75564 520 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 SYF2O95926 243 aaKnown RBP5.43□□□□□ -1.54
VRK1-205ENST00000555402 TOMM40O96008 361 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 TUBBP07437 444 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 ANXA7P20073 488 aaKnown RBP5.43□□□□□ -1.54
VRK1-205ENST00000555402 IL11P20809 199 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 PON1P27169 355 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 HOXA13P31271 388 aaPredicted RBP5.43□□□□□ -1.54
VRK1-205ENST00000555402 PIGAP37287 484 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 CDKN2AP42771 156 aaKnown RBP5.43□□□□□ -1.54
VRK1-205ENST00000555402 PRCPP42785 496 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 ME1P48163 572 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 ENTPD1P49961 510 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 SRSF1Q07955 248 aaKnown RBP eCLIP5.43□□□□□ -1.54
VRK1-205ENST00000555402 GPR18Q14330 331 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 PTGR1Q14914 329 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 PCGF3Q3KNV8 242 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 MMEL1Q495T6 779 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 FAM133BQ5BKY9 247 aaKnown RBP5.43□□□□□ -1.54
VRK1-205ENST00000555402 LRIF1Q5T3J3 769 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 DCAF12L2Q5VW00 463 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 PMS2CLQ68D20 193 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 PDXDC1Q6P996 788 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 PIM3Q86V86 326 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 DNAAF5Q86Y56 855 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 LINC00346Q8IVM7 164 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 ARFGAP1Q8N6T3 406 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 MIGA1Q8NAN2 632 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 AVL9Q8NBF6 648 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 KCTD6Q8NC69 237 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 HJURPQ8NCD3 748 aaPredicted RBP5.43□□□□□ -1.54
VRK1-205ENST00000555402 AGBL3Q8NEM8 1001 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 OR8K5Q8NH50 307 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 MPLKIPQ8TAP9 179 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 ARRDC2Q8TBH0 407 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 SLC22A18Q96BI1 424 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 APOLD1Q96LR9 279 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 GAD1Q99259 594 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 SEPT5Q99719 369 aaPredicted RBP5.43□□□□□ -1.54
VRK1-205ENST00000555402 KLHL4Q9C0H6 718 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 CATSPERBQ9H7T0 1116 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 ARHGEF38Q9NXL2 777 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 CMAHPQ9Y471 501 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 FAM169AQ9Y6X4 670 aa5.43□□□□□ -1.54
VRK1-205ENST00000555402 OR2A25A4D2G3 310 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 LRRC72A6NJI9 287 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 TSPY2A6NKD2 308 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 MS4A18H0YCH9 400 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 H0YGN5 161 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 VCYO14598 125 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 ADAM20O43506 726 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 LDB2O43679 373 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 DKC1O60832 514 aaKnown RBP eCLIP5.42□□□□□ -1.54
VRK1-205ENST00000555402 HIST1H2ABP04908 130 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 CYP1A2P05177 515 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 APOA4P06727 396 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 TSPY3P0CV98 308 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 TSPY8P0CW00 308 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 T-ENOLP0DO92 83 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 ACTN1P12814 892 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 HIST1H2ADP20671 130 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 GPTP24298 496 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 THPOP40225 353 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 HSD17B4P51659 736 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 STAT2P52630 851 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 SELENOVP59797 346 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 MRPS5P82675 430 aaKnown RBP5.42□□□□□ -1.54
VRK1-205ENST00000555402 TSPY1Q01534 308 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 GARNL3Q5VVW2 1013 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 SIGIRRQ6IA17 410 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 METTL2BQ6P1Q9 378 aaKnown RBP5.42□□□□□ -1.54
VRK1-205ENST00000555402 PQLC2Q6ZP29 291 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 CFAP77Q6ZQR2 320 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 Q6ZTK2 550 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 HIST3H2AQ7L7L0 130 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 CTU1Q7Z7A3 348 aaKnown RBP5.42□□□□□ -1.54
VRK1-205ENST00000555402 KBTBD6Q86V97 674 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 ADHFE1Q8IWW8 467 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 IL17RCQ8NAC3 791 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 TMEM163Q8TC26 289 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 PRPF31Q8WWY3 499 aaKnown RBP5.42□□□□□ -1.54
VRK1-205ENST00000555402 INPP5DQ92835 1189 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 METTL2AQ96IZ6 378 aaKnown RBP5.42□□□□□ -1.54
VRK1-205ENST00000555402 CNDP2Q96KP4 475 aaKnown RBP5.42□□□□□ -1.54
VRK1-205ENST00000555402 NLRP4Q96MN2 994 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 CAMK1GQ96NX5 476 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 GCNAQ96QF7 691 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 C1QTNF1Q9BXJ1 281 aa5.42□□□□□ -1.54
VRK1-205ENST00000555402 MKKSQ9NPJ1 570 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms