RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 GPR1P46091 355 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 RABIFP47224 123 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 PLTPP55058 493 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 YPEL5P62699 121 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 INPP5AQ14642 412 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 TEAD4Q15561 434 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 HIF1AQ16665 826 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 CCDC38Q502W7 563 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 TSTD2Q5T7W7 516 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 HENMT1Q5T8I9 393 aaKnown RBP14.23□□□□□ -0.13
CHD8-208ENST00000555301 PDPK2PQ6A1A2 396 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 RAET1GQ6H3X3 334 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 PNCKQ6P2M8 343 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 CASC4Q6P4E1 433 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 GCNT7Q6ZNI0 430 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 RFLNAQ6ZTI6 216 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 ABI3BPQ7Z7G0 1075 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 TRAM1L1Q8N609 369 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 MFSD2AQ8NA29 543 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 GPR26Q8NDV2 337 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 SCAMP4Q969E2 229 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 LRRC39Q96DD0 335 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 BMFQ96LC9 184 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 NAT9Q9BTE0 207 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 RIOK2Q9BVS4 552 aaKnown RBP14.23□□□□□ -0.13
CHD8-208ENST00000555301 KIFC1Q9BW19 673 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 FOXP3Q9BZS1 431 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 CHRAC1Q9NRG0 131 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 TMEM74BQ9NUR3 256 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 NLE1Q9NVX2 485 aaPredicted RBP14.23□□□□□ -0.13
CHD8-208ENST00000555301 SYBUQ9NX95 663 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 SOX13Q9UN79 622 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 KCTD3Q9Y597 815 aa14.23□□□□□ -0.13
CHD8-208ENST00000555301 ATXN2Q99700 1313 aaKnown RBP14.22□□□□□ -0.13
CHD8-208ENST00000555301 GLYATL1P3A0A0U1RQE8 302 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 ESYT3A0FGR9 886 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 POM121BA6NF01 834 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 PROB1E7EW31 1015 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 H7C0S8 307 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 RHOXF2BP0C7M4 288 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 PSMA3P25788 255 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 TRIM23P36406 574 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 MPLP40238 635 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 CLDN2P57739 230 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 PFN3P60673 137 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 CRADDP78560 199 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 DHX9Q08211 1270 aaKnown RBP14.22□□□□□ -0.13
CHD8-208ENST00000555301 CBLBQ13191 982 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 ITGA9Q13797 1035 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 PTPRCAPQ14761 206 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 DUOXA1Q1HG43 343 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 TEX35Q5T0J7 233 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 FNBP1LQ5T0N5 605 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 ALS2CLQ60I27 953 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 CENPUQ71F23 418 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 DCP2Q8IU60 420 aaKnown RBP14.22□□□□□ -0.13
CHD8-208ENST00000555301 CCNJLQ8IV13 435 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 IFT20Q8IY31 132 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 LRRN4CLQ8ND94 238 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 OR13C4Q8NGS5 318 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 FBXO25Q8TCJ0 367 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 KLHDC7BQ96G42 594 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 DNAJC1Q96KC8 554 aaKnown RBP14.22□□□□□ -0.13
CHD8-208ENST00000555301 SIGLEC10Q96LC7 697 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 HINFPQ9BQA5 517 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 RHOXF2Q9BQY4 288 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 SPATA16Q9BXB7 569 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 PHACTR1Q9C0D0 580 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 ARRDC1-AS1Q9H2J1 176 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 WDR26Q9H7D7 661 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 IL26Q9NPH9 171 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 MAD1L1Q9Y6D9 718 aa14.22□□□□□ -0.13
CHD8-208ENST00000555301 FAM237BA0A1B0GVD1 139 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 A0A1W2PR77 199 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 H0Y8X5 98 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 VILLO15195 856 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 EIF3HO15372 352 aaKnown RBP eCLIP14.21□□□□□ -0.133e-7■■■□□ 17.9
CHD8-208ENST00000555301 HOXC4P09017 264 aaPredicted RBP14.21□□□□□ -0.13
CHD8-208ENST00000555301 THEGLP0DJG4 465 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 PAMP19021 973 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 C21orf59P57076 290 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 TMPRSS15P98073 1019 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 ACVR1Q04771 509 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 CUL1Q13616 776 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 TRADDQ15628 312 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 BBS9Q3SYG4 887 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 ZDHHC24Q6UX98 284 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 FAM151BQ6UXP7 276 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 ADAMTSL4Q6UY14 1074 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 Q6ZSR6 202 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 PTAR1Q7Z6K3 402 aaPredicted RBP14.21□□□□□ -0.13
CHD8-208ENST00000555301 MPP5Q8N3R9 675 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 PLA2G15Q8NCC3 412 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 OR13J1Q8NGT2 312 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 IFT81Q8WYA0 676 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 STAMBPL1Q96FJ0 436 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 CDKN2AIPNLQ96HQ2 116 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 EBNA1BP2Q99848 306 aaKnown RBP14.21□□□□□ -0.13
CHD8-208ENST00000555301 APOOQ9BUR5 198 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 GDF3Q9NR23 364 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms