RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 ANKRD20A1Q5TYW2 823 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 ANKRD20A3Q5VUR7 823 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 FBXW10Q5XX13 1052 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 LRRC8BQ6P9F7 803 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 RFX8Q6ZV50 586 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 PARP9Q8IXQ6 854 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 CCDC185Q8N715 623 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 TCP10LQ8TDR4 215 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 ZNF75CPQ92670 426 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-216ENST00000554975 BIRC7Q96CA5 298 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 HDAC11Q96DB2 347 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 NAF1Q96HR8 494 aaKnown RBP11.19□□□□□ -0.62
SHMT2-216ENST00000554975 CNDP2Q96KP4 475 aaKnown RBP11.19□□□□□ -0.62
SHMT2-216ENST00000554975 TSSK1BQ9BXA7 367 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 SAR1AQ9NR31 198 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 NSMCE4AQ9NXX6 385 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 MARCH2Q9P0N8 246 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 TXNDC16Q9P2K2 825 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 TRHDEQ9UKU6 1024 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 CLEC4EQ9ULY5 219 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 PCDHGA1Q9Y5H4 931 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 MAD1L1Q9Y6D9 718 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 TEX15Q9BXT5 2789 aa11.19□□□□□ -0.62
SHMT2-216ENST00000554975 BSNQ9UPA5 3926 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 A0A1B0GTQ1 180 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 SLC12A8A0AV02 714 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 SDR42E2A6NKP2 422 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 BIRC5O15392 142 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 GLRA3O75311 464 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 GABBR2O75899 941 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 WFS1O76024 890 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 WISP1O95388 367 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 GOT1P17174 413 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 ADRA1DP25100 572 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 PPARDQ03181 441 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 DPYSQ14117 519 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 SLC1A5Q15758 541 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 TBC1D25Q3MII6 688 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 FAM133BQ5BKY9 247 aaKnown RBP11.18□□□□□ -0.62
SHMT2-216ENST00000554975 SPANXN3Q5MJ09 141 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 BRMS1LQ5PSV4 323 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 ARHGAP40Q5TG30 622 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 ICE2Q659A1 982 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 TMEM215Q68D42 235 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 KLHDC10Q6PID8 442 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 KYAT3Q6YP21 454 aaKnown RBP11.18□□□□□ -0.62
SHMT2-216ENST00000554975 UNC5AQ6ZN44 842 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 Q6ZNB5 142 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 TIFABQ6ZNK6 161 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 CAND1Q86VP6 1230 aaKnown RBP11.18□□□□□ -0.62
SHMT2-216ENST00000554975 CLEC4CQ8WTT0 213 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 C10orf82Q8WW14 230 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 SREK1Q8WXA9 508 aaKnown RBP11.18□□□□□ -0.62
SHMT2-216ENST00000554975 EDEM1Q92611 657 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 TTC9Q92623 222 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 MRRFQ96E11 262 aaKnown RBP11.18□□□□□ -0.62
SHMT2-216ENST00000554975 MANSC1Q9H8J5 431 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 C10orf88Q9H8K7 445 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 DONSONQ9NYP3 566 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 SLC27A6Q9Y2P4 619 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 MTO1Q9Y2Z2 717 aaKnown RBP11.18□□□□□ -0.62
SHMT2-216ENST00000554975 FLNCQ14315 2725 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 NBPF19A0A087WUL8 3843 aa11.18□□□□□ -0.62
SHMT2-216ENST00000554975 COL27A1Q8IZC6 1860 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-216ENST00000554975 A0A1W2PPM1 405 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 FGF10O15520 208 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-216ENST00000554975 MGRN1O60291 552 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 TSPAN3O60637 253 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 STC2O76061 302 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 LDOC1O95751 146 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-216ENST00000554975 PENKP01210 267 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-216ENST00000554975 WNT1P04628 370 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 POLBP06746 335 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 ACADMP11310 421 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 EZRP15311 586 aaKnown RBP11.17□□□□□ -0.62
SHMT2-216ENST00000554975 VAV1P15498 845 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 AMPD1P23109 780 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 SERPINB4P48594 390 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 MNAT1P51948 309 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 MGAT5Q09328 741 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 AP1B1Q10567 949 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 PRPSAP1Q14558 356 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 TEAD4Q15561 434 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 TBCCQ15814 346 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 FAXCQ5TGI0 409 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 OTUD1Q5VV17 481 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-216ENST00000554975 BSPRYQ5W0U4 402 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 FAM91A1Q658Y4 838 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 PM20D1Q6GTS8 502 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 CGB2Q6NT52 195 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 ZNF534Q76KX8 674 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 NLRP9Q7RTR0 991 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 TAB3Q8N5C8 712 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-216ENST00000554975 EID2Q8N6I1 236 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 ZNF366Q8N895 744 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 CFAP61Q8NHU2 1237 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 SIGLEC10Q96LC7 697 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 C7orf26Q96N11 449 aa11.17□□□□□ -0.62
SHMT2-216ENST00000554975 SRPK1Q96SB4 655 aaKnown RBP11.17□□□□□ -0.62
SHMT2-216ENST00000554975 TRIM4Q9C037 500 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms