RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 FMO2Q99518 471 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 ZSCAN5AQ9BUG6 496 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 ABCG8Q9H221 673 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 ANKZF1Q9H8Y5 726 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 TREX1Q9NSU2 369 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 MAD1L1Q9Y6D9 718 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 TEX264Q9Y6I9 313 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 FPGTO14772 594 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 USP1O94782 785 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 POLBP06746 335 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 TSHRP16473 764 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 PGAM1P18669 254 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 PAMP19021 973 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 MCM3P25205 808 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 ECHS1P30084 290 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 PTGER3P43115 390 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 RACK1P63244 317 aaKnown RBP16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 OVGP1Q12889 678 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 PDIA2Q13087 525 aaKnown RBP16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 MPP5Q8N3R9 675 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 TRAM1L1Q8N609 369 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 GPR26Q8NDV2 337 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 OR13C4Q8NGS5 318 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 SNX19Q92543 992 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 KLK6Q92876 244 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 SERAC1Q96JX3 654 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 DNAJC1Q96KC8 554 aaKnown RBP16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 EBF2Q9HAK2 575 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 BPIFA1Q9NP55 256 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 IL26Q9NPH9 171 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 SUSD2Q9UGT4 822 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 RAB23Q9ULC3 237 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 KCTD3Q9Y597 815 aa16.38■□□□□ 0.21
SPTLC2-203ENST00000554901 ABCA7Q8IZY2 2146 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 GLYATL1P3A0A0U1RQE8 302 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 PRR5-ARHGAP8B1AHC4 643 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 BUD23O43709 281 aaKnown RBP16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 TRIM23P36406 574 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 DHPSP49366 369 aaPredicted RBP16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 ITGA9Q13797 1035 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 STAT4Q14765 748 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 PEAR1Q5VY43 1037 aaPredicted RBP16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 RABEPKQ7Z6M1 372 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 ABI3BPQ7Z7G0 1075 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 IQCHQ86VS3 1027 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 RELL1Q8IUW5 271 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 AGGF1Q8N302 714 aaeCLIP16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 DEFB119Q8N690 84 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 OR13J1Q8NGT2 312 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 C1orf216Q8TAB5 229 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 CDKN2AIPNLQ96HQ2 116 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 ZNF778Q96MU6 729 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 PWWP2AQ96N64 755 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 RIOK2Q9BVS4 552 aaKnown RBP16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 EIF2B4Q9UI10 523 aaKnown RBP16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 R4GN57 208 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 SPAG17Q6Q759 2223 aa16.37■□□□□ 0.21
SPTLC2-203ENST00000554901 RAD51BO15315 384 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 HOXC4P09017 264 aaPredicted RBP16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 GNSP15586 552 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 ELK3P41970 407 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 YPEL5P62699 121 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 FRG1Q14331 258 aaKnown RBP16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 IRF4Q15306 451 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 GPR33Q49SQ1 333 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 ANKRD20A4Q4UJ75 823 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 KIAA0930Q6ICG6 404 aaPredicted RBP16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 WDR93Q6P2C0 686 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 PNCKQ6P2M8 343 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 ADAMTSL4Q6UY14 1074 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 KYAT3Q6YP21 454 aaKnown RBP16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 PRR23BQ6ZRT6 265 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 RFLNAQ6ZTI6 216 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 ZBED8Q8IZ13 594 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 RGL4Q8IZJ4 473 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 PYROXD1Q8WU10 500 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 SCAMP4Q969E2 229 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 VPS35Q96QK1 796 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 ZC3H7BQ9UGR2 993 aaKnown RBP16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 CD84Q9UIB8 345 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 FKBPLQ9UIM3 349 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 NFU1Q9UMS0 254 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 PCDHGA5Q9Y5G8 931 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 RPS6KL1Q9Y6S9 549 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 LRRK1Q38SD2 2015 aa16.36■□□□□ 0.21
SPTLC2-203ENST00000554901 THADAQ6YHU6 1953 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 A6NNZ2 444 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 AGAP14A8MT82 685 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 MAGEC1O60732 1142 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 SRP72O76094 671 aaKnown RBP16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 NMBRP28336 390 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 IGFALSP35858 605 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 GPR1P46091 355 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 PRAMEP78395 509 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 XIAPP98170 497 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 PTPRCAPQ14761 206 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 ERCC6LQ2NKX8 1250 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 SPANXN3Q5MJ09 141 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 RAET1GQ6H3X3 334 aa16.35■□□□□ 0.21
SPTLC2-203ENST00000554901 AFTPHQ6ULP2 937 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms