RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 GLT6D1Q7Z4J2 308 aa6.74□□□□□ -1.33
LINC00517-202ENST00000554257 WDR5BQ86VZ2 330 aa6.74□□□□□ -1.33
LINC00517-202ENST00000554257 TMEM145Q8NBT3 493 aa6.74□□□□□ -1.33
LINC00517-202ENST00000554257 OR4K2Q8NGD2 314 aa6.74□□□□□ -1.33
LINC00517-202ENST00000554257 FBF1Q8TES7 1133 aa6.74□□□□□ -1.33
LINC00517-202ENST00000554257 SLC44A1Q8WWI5 657 aa6.74□□□□□ -1.33
LINC00517-202ENST00000554257 TTC25Q96NG3 672 aa6.74□□□□□ -1.33
LINC00517-202ENST00000554257 HHIPQ96QV1 700 aa6.74□□□□□ -1.33
LINC00517-202ENST00000554257 SRPK1Q96SB4 655 aaKnown RBP6.74□□□□□ -1.33
LINC00517-202ENST00000554257 GULP1Q9UBP9 304 aa6.74□□□□□ -1.33
LINC00517-202ENST00000554257 ZC3H7BQ9UGR2 993 aaKnown RBP6.74□□□□□ -1.33
LINC00517-202ENST00000554257 FKBPLQ9UIM3 349 aa6.74□□□□□ -1.33
LINC00517-202ENST00000554257 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.74□□□□□ -1.33
LINC00517-202ENST00000554257 C1QTNF3-AMACRE9PGA6 284 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 WNT9AO14904 365 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 PIAS1O75925 651 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 LPOP22079 712 aaPredicted RBP6.73□□□□□ -1.33
LINC00517-202ENST00000554257 CA4P22748 312 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 TRIM23P36406 574 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 ETV3P41162 512 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 SLC1A2P43004 574 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 CASP8Q14790 479 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 LONRF1Q17RB8 773 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 KBTBD12Q3ZCT8 623 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 CTSL3PQ5NE16 218 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 KCTD16Q68DU8 428 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 LRIG3Q6UXM1 1119 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 NLRP9Q7RTR0 991 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 SPNS2Q8IVW8 549 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 CAMKK1Q8N5S9 505 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 PLA2G15Q8NCC3 412 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 PPHLN1Q8NEY8 458 aaKnown RBP6.73□□□□□ -1.33
LINC00517-202ENST00000554257 TBATAQ96M53 351 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 ZFYVE1Q9HBF4 777 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 VPS18Q9P253 973 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 MTRF1LQ9UGC7 380 aaKnown RBP6.73□□□□□ -1.33
LINC00517-202ENST00000554257 ZNF180Q9UJW8 692 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 MRPS17Q9Y2R5 130 aaKnown RBP6.73□□□□□ -1.33
LINC00517-202ENST00000554257 COQ6Q9Y2Z9 468 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 CCDC163A0A0D9SF12 145 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 C1orf232A0A0U1RR37 186 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 TSPAN6O43657 245 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 SPAG6O75602 509 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 IL1BP01584 269 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 FUCA1P04066 466 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 ERVK-10P10266 1014 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 SARNPP82979 210 aaKnown RBP6.73□□□□□ -1.33
LINC00517-202ENST00000554257 UBXN2BQ14CS0 331 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 CCDC70Q6NSX1 233 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 NEK5Q6P3R8 708 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 KDM7AQ6ZMT4 941 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 USP45Q70EL2 814 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 DSG4Q86SJ6 1040 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 SLC26A11Q86WA9 606 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.73□□□□□ -1.33
LINC00517-202ENST00000554257 OR2W6PQ8NHA6 318 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 BLOC1S5Q8TDH9 187 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 LPGAT1Q92604 370 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 PPP1R16AQ96I34 528 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 TEX101Q9BY14 249 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 TWSG1Q9GZX9 223 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 EPHX3Q9H6B9 360 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 MBNL1Q9NR56 388 aaKnown RBP6.73□□□□□ -1.33
LINC00517-202ENST00000554257 BFARQ9NZS9 450 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 BUD23O43709 281 aaKnown RBP6.73□□□□□ -1.33
LINC00517-202ENST00000554257 HOXC4P09017 264 aaPredicted RBP6.73□□□□□ -1.33
LINC00517-202ENST00000554257 CD9P21926 228 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 ACRV1P26436 265 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 IGFALSP35858 605 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 POLR2LP62875 67 aaKnown RBP6.73□□□□□ -1.33
LINC00517-202ENST00000554257 NFATC2Q13469 925 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 ZKSCAN8Q15776 578 aaPredicted RBP6.73□□□□□ -1.33
LINC00517-202ENST00000554257 TMEM31Q5JXX7 168 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 TPRG1LQ5T0D9 272 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 FAM46CQ5VWP2 391 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 GCNT7Q6ZNI0 430 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 C3orf62Q6ZUJ4 267 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 SLC41A1Q8IVJ1 513 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 DENND6AQ8IWF6 608 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 HDDC3Q8N4P3 179 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 ZNF669Q96BR6 464 aaPredicted RBP6.73□□□□□ -1.33
LINC00517-202ENST00000554257 TLCD1Q96CP7 247 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 LATS2Q9NRM7 1088 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 CTNNAL1Q9UBT7 734 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 OAS3Q9Y6K5 1087 aaKnown RBP6.73□□□□□ -1.33
LINC00517-202ENST00000554257 RPS6KL1Q9Y6S9 549 aa6.73□□□□□ -1.33
LINC00517-202ENST00000554257 SRP72O76094 671 aaKnown RBP6.72□□□□□ -1.33
LINC00517-202ENST00000554257 CRTAMO95727 393 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 AHSGP02765 367 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 CYP2A6P11509 494 aaPredicted RBP6.72□□□□□ -1.33
LINC00517-202ENST00000554257 OGNP20774 298 aaKnown RBP6.72□□□□□ -1.33
LINC00517-202ENST00000554257 CCR5P51681 352 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 MPP1Q00013 466 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 RAD51Q06609 339 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 ELP6Q0PNE2 266 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 NAB1Q13506 487 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 HLTFQ14527 1009 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC00517-202ENST00000554257 WSCD2Q2TBF2 565 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 PDPK2PQ6A1A2 396 aa6.72□□□□□ -1.33
LINC00517-202ENST00000554257 KIAA1161Q6NSJ0 714 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms