RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 SQSTM1Q13501 440 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 LRP8Q14114 963 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 DPYSL3Q14195 570 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 SLC18A3Q16572 532 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 ANKRD20A8PQ5CZ79 823 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 LRRC66Q68CR7 880 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 NCBP2-AS2Q69YL0 99 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 RAET1GQ6H3X3 334 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 PCSK4Q6UW60 755 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 ADAMTSL4Q6UY14 1074 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 H2AFVQ71UI9 128 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 NRROSQ86YC3 692 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 VSTM4Q8IW00 320 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 SLITRK4Q8IW52 837 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 MAP7D3Q8IWC1 876 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 NRSN1Q8IZ57 195 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 RNF214Q8ND24 703 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 CCL4L1Q8NHW4 92 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 ZNF564Q8TBZ8 553 aaPredicted RBP6.59□□□□□ -1.35
SLIRP-203ENST00000554074 PDCD6IPQ8WUM4 868 aaKnown RBP6.59□□□□□ -1.35
SLIRP-203ENST00000554074 TTC9Q92623 222 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 HDAC11Q96DB2 347 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 BTBD6Q96KE9 485 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 CCNL2Q96S94 520 aaPredicted RBP6.59□□□□□ -1.35
SLIRP-203ENST00000554074 CMKLR1Q99788 373 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 DPYSL5Q9BPU6 564 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 TDRD1Q9BXT4 1180 aaKnown RBP6.59□□□□□ -1.35
SLIRP-203ENST00000554074 TRIM5Q9C035 493 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 XPO4Q9C0E2 1151 aaKnown RBP6.59□□□□□ -1.35
SLIRP-203ENST00000554074 RBSNQ9H1K0 784 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 DPEP2Q9H4A9 486 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 SYNDIG1Q9H7V2 258 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 CARS2Q9HA77 564 aaKnown RBP6.59□□□□□ -1.35
SLIRP-203ENST00000554074 CPNE5Q9HCH3 593 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 NT5MQ9NPB1 228 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 TAAR2Q9P1P5 351 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 SUFUQ9UMX1 484 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 PIKFYVEQ9Y2I7 2098 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 SPTA1P02549 2419 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 SSU72P8A0A1W2PR75 194 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 RGSL1A5PLK6 1076 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 GOLGA6L6A8MZA4 724 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 B4DGG1 531 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.58□□□□□ -1.36
SLIRP-203ENST00000554074 HGSO14964 777 aaPredicted RBP6.58□□□□□ -1.36
SLIRP-203ENST00000554074 PRLP01236 227 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 FUCA1P04066 466 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 CD48P09326 243 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 JMJD7P0C870 316 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 LIPCP11150 499 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 CDC25BP30305 580 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 ADCY8P40145 1251 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 SSR1P43307 286 aaKnown RBP6.58□□□□□ -1.36
SLIRP-203ENST00000554074 GPR1P46091 355 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 GNPDA1P46926 289 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 FASLGP48023 281 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 DSC2Q02487 901 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 PTSQ03393 145 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 CFHR1Q03591 330 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 PPIDQ08752 370 aaKnown RBP6.58□□□□□ -1.36
SLIRP-203ENST00000554074 TRA2AQ13595 282 aaKnown RBP eCLIP6.58□□□□□ -1.36
SLIRP-203ENST00000554074 IHHQ14623 411 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 TCEA2Q15560 299 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 SLC14A2Q15849 920 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 ASTE1Q2TB18 679 aaPredicted RBP6.58□□□□□ -1.36
SLIRP-203ENST00000554074 MAP9Q49MG5 647 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 PYCR3Q53H96 274 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 ARHGAP40Q5TG30 622 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 FOXR1Q6PIV2 292 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 XKR5Q6UX68 686 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 CCDC81Q6ZN84 652 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 TSPAN33Q86UF1 283 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 PIM3Q86V86 326 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 GAS2L3Q86XJ1 694 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 CNGA4Q8IV77 575 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 NAGSQ8N159 534 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 ZNF843Q8N446 348 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 PQLC3Q8N755 202 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 KCTD6Q8NC69 237 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 EXD1Q8NHP7 514 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 ARRDC2Q8TBH0 407 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 ZDHHC1Q8WTX9 485 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 CPLX3Q8WVH0 158 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 CTNNBL1Q8WYA6 563 aaPredicted RBP6.58□□□□□ -1.36
SLIRP-203ENST00000554074 AP2M1Q96CW1 435 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 COX14Q96I36 57 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 OR2M4Q96R27 311 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 DNAJC7Q99615 494 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 FOXP3Q9BZS1 431 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 CDH19Q9H159 772 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 ABCG8Q9H221 673 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 RMI1Q9H9A7 625 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 SPATS2LQ9NUQ6 558 aaKnown RBP6.58□□□□□ -1.36
SLIRP-203ENST00000554074 RBM22Q9NW64 420 aaKnown RBP eCLIP6.58□□□□□ -1.367e-6■■■□□ 17.4
SLIRP-203ENST00000554074 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.58□□□□□ -1.36
SLIRP-203ENST00000554074 AKAP7Q9P0M2 348 aaPredicted RBP6.58□□□□□ -1.36
SLIRP-203ENST00000554074 SEPT10Q9P0V9 454 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 VPS18Q9P253 973 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 CTTNBP2NLQ9P2B4 639 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 IMPACTQ9P2X3 320 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms