RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TERB1Q8NA31 727 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 CFAP36Q96G28 342 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 RPL10LQ96L21 214 aaKnown RBP14.51□□□□□ -0.09
SHMT2-208ENST00000553868 TMEM109Q9BVC6 243 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 TM6SF2Q9BZW4 377 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 ROPN1BQ9BZX4 212 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-208ENST00000553868 EPB41L4BQ9H329 900 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 ATP13A3Q9H7F0 1226 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 ROPN1Q9HAT0 212 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-208ENST00000553868 MED4Q9NPJ6 270 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 SYBUQ9NX95 663 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 ELOVL2Q9NXB9 296 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 KNL1Q8NG31 2342 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 FAM237BA0A1B0GVD1 139 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 A0A1W2PQ67 120 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 RRP8O43159 456 aaKnown RBP14.5□□□□□ -0.09
SHMT2-208ENST00000553868 SMAD6O43541 496 aaKnown RBP14.5□□□□□ -0.09
SHMT2-208ENST00000553868 POP4O95707 220 aaKnown RBP14.5□□□□□ -0.09
SHMT2-208ENST00000553868 APODP05090 189 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 ADRA1DP25100 572 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 SERPINA4P29622 427 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 GRIA2P42262 883 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 KIR2DL1P43626 348 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-208ENST00000553868 STK19P49842 368 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-208ENST00000553868 RPL26P61254 145 aaKnown RBP14.5□□□□□ -0.09
SHMT2-208ENST00000553868 KDSRQ06136 332 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 BCL2L1Q07817 233 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 DLG2Q15700 870 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 CARD16Q5EG05 197 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 COLEC12Q5KU26 742 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 SPANXN3Q5MJ09 141 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 CEP85LQ5SZL2 805 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 DENND5AQ6IQ26 1287 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 NLRP9Q7RTR0 991 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 SLC25A41Q8N5S1 370 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 PAF1Q8N7H5 531 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 GSDMBQ8TAX9 411 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 RANBP9Q96S59 729 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 TDRD1Q9BXT4 1180 aaKnown RBP14.5□□□□□ -0.09
SHMT2-208ENST00000553868 TRIM4Q9C037 500 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 GAREM1Q9H706 876 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 MRM3Q9HC36 420 aaKnown RBP14.5□□□□□ -0.09
SHMT2-208ENST00000553868 TM7SF3Q9NS93 570 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 SOX13Q9UN79 622 aa14.5□□□□□ -0.09
SHMT2-208ENST00000553868 RPL26L1Q9UNX3 145 aaKnown RBP14.5□□□□□ -0.09
SHMT2-208ENST00000553868 MYO9AB2RTY4 2548 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 CABIN1Q9Y6J0 2220 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 TTC24A2A3L6 582 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-208ENST00000553868 HEATR9A2RTY3 570 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 TBC1D3BA6NDS4 549 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 ERVH48-1M5A8F1 160 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 TCEA3O75764 348 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 MYZAPP0CAP1 466 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 PAMP19021 973 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 WASP42768 502 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 GPX6P59796 221 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 BNC1Q01954 994 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 FRG1Q14331 258 aaKnown RBP14.49□□□□□ -0.09
SHMT2-208ENST00000553868 MYLK3Q32MK0 819 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 SIRPB2Q5JXA9 342 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 CERCAMQ5T4B2 595 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 ATXN7L2Q5T6C5 722 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-208ENST00000553868 ARMC12Q5T9G4 340 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 STEAP4Q687X5 459 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 TMEM215Q68D42 235 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 ZNF449Q6P9G9 518 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 CYS1Q717R9 158 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 KDELC2Q7Z4H8 507 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 IGDCC3Q8IVU1 814 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 NDUFAF2Q8N183 169 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 MPP5Q8N3R9 675 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 UHMK1Q8TAS1 419 aaKnown RBP14.49□□□□□ -0.09
SHMT2-208ENST00000553868 SRPK1Q96SB4 655 aaKnown RBP14.49□□□□□ -0.09
SHMT2-208ENST00000553868 CYTH2Q99418 400 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 WDR83Q9BRX9 315 aaKnown RBP14.49□□□□□ -0.09
SHMT2-208ENST00000553868 CPEB1Q9BZB8 566 aaKnown RBP14.49□□□□□ -0.09
SHMT2-208ENST00000553868 STMN4Q9H169 189 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-208ENST00000553868 TNKS2Q9H2K2 1166 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 HECAQ9UBI9 543 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-208ENST00000553868 FETUBQ9UGM5 382 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 NFS1Q9Y697 457 aa14.49□□□□□ -0.09
SHMT2-208ENST00000553868 EXOC1LA0A1B0GW35 172 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 RASGRF2O14827 1237 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 NPC1O15118 1278 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 TRIM24O15164 1050 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 USP1O94782 785 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 KAT7O95251 611 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 TPH1P17752 444 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 SSTR1P30872 391 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 CHRNA4P43681 627 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 GRIA4P48058 902 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 EPHB1P54762 984 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 TLE3Q04726 772 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 ZNF844Q08AG5 666 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 NAB1Q13506 487 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 OLIG2Q13516 323 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 KRT71Q3SY84 523 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 FNDC3BQ53EP0 1204 aaKnown RBP14.48□□□□□ -0.09
SHMT2-208ENST00000553868 UNC5AQ6ZN44 842 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 CAPN12Q6ZSI9 719 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms