RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 HTRA2O43464 458 aaPredicted RBP9.04□□□□□ -0.96
SYNE2-209ENST00000553308 STK17BO94768 372 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 MAP3K6O95382 1288 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 EML2O95834 649 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 SOD1P00441 154 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 ERCC2P18074 760 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 TCN2P20062 427 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 FASLGP48023 281 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 CD97P48960 835 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 MLLT10P55197 1068 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 MC2RQ01718 297 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 IL10RBQ08334 325 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 NSUN2Q08J23 767 aaKnown RBP eCLIP9.04□□□□□ -0.96
SYNE2-209ENST00000553308 SLC10A7Q0GE19 358 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 ABHD18Q0P651 414 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 TRAF2Q12933 501 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 RFTN1Q14699 578 aaPredicted RBP9.04□□□□□ -0.96
SYNE2-209ENST00000553308 LBRQ14739 615 aaKnown RBP9.04□□□□□ -0.96
SYNE2-209ENST00000553308 TCP11X2Q5H9J9 407 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 PPP1R15BQ5SWA1 713 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 CEACAM20Q6UY09 585 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 RFLNAQ6ZTI6 216 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 RFX8Q6ZV50 586 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 MARK2Q7KZI7 788 aaKnown RBP9.04□□□□□ -0.96
SYNE2-209ENST00000553308 KDELC2Q7Z4H8 507 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 ARHGAP22Q7Z5H3 698 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 CBARPQ8N350 705 aaPredicted RBP9.04□□□□□ -0.96
SYNE2-209ENST00000553308 PGBD5Q8N414 524 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 OR10G6Q8NH81 332 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 SPOCK2Q92563 424 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 SCARF2Q96GP6 870 aaPredicted RBP9.04□□□□□ -0.96
SYNE2-209ENST00000553308 PSKH2Q96QS6 385 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 PEBP4Q96S96 227 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 KCTD15Q96SI1 283 aaPredicted RBP9.04□□□□□ -0.96
SYNE2-209ENST00000553308 SLC38A3Q99624 504 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 SNRNP25Q9BV90 132 aaKnown RBP9.04□□□□□ -0.96
SYNE2-209ENST00000553308 LRRC4CQ9HCJ2 640 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 DONSONQ9NYP3 566 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 CD84Q9UIB8 345 aa9.04□□□□□ -0.96
SYNE2-209ENST00000553308 TMEM184BQ9Y519 407 aaPredicted RBP9.04□□□□□ -0.96
SYNE2-209ENST00000553308 RELNP78509 3460 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.03□□□□□ -0.96
SYNE2-209ENST00000553308 DAPK3O43293 454 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 SOCS5O75159 536 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 DLGAP3O95886 979 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 KRT7P08729 469 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 CYP2A6P11509 494 aaPredicted RBP9.03□□□□□ -0.96
SYNE2-209ENST00000553308 CTPS1P17812 591 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 F8A1P23610 371 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 TEAD1P28347 426 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 STAT5AP42229 794 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 MAPK9P45984 424 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 GPR1P46091 355 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 UQCRFS1P47985 274 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 RENBPP51606 427 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 MC1RQ01726 317 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 HHEXQ03014 270 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 KLRB1Q12918 225 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 NFATC2Q13469 925 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 PEX6Q13608 980 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 SEPT6Q14141 434 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 ZNF235Q14590 738 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 PYCR3Q53H96 274 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.03□□□□□ -0.96
SYNE2-209ENST00000553308 TMCO4Q5TGY1 634 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 DCUN1D2Q6PH85 259 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 WDR74Q6RFH5 385 aaPredicted RBP9.03□□□□□ -0.96
SYNE2-209ENST00000553308 TECPR1Q7Z6L1 1165 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 ATCAYQ86WG3 371 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 SFRP1Q8N474 314 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 ARFGAP1Q8N6T3 406 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 NCSTNQ92542 709 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 SMIM14Q96QK8 99 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 EFHD1Q9BUP0 239 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 NOD2Q9HC29 1040 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 FBXO8Q9NRD0 319 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 KCTD5Q9NXV2 234 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 KLHL3Q9UH77 587 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 PCSK1NQ9UHG2 260 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 PCYT1BQ9Y5K3 369 aaPredicted RBP9.03□□□□□ -0.96
SYNE2-209ENST00000553308 KCNMB2Q9Y691 235 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 NBASA2RRP1 2371 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 LRRK2Q5S007 2527 aa9.03□□□□□ -0.96
SYNE2-209ENST00000553308 PSMD11O00231 422 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 ATMINO43313 823 aaPredicted RBP9.02□□□□□ -0.97
SYNE2-209ENST00000553308 PGLSO95336 258 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 PEX11BO96011 259 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 FURINP09958 794 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 ZNF28P17035 718 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 PSMA2P25787 234 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 EEF1GP26641 437 aaKnown RBP9.02□□□□□ -0.97
SYNE2-209ENST00000553308 MAN1A1P33908 653 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 MAXP61244 160 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 UBE2HP62256 183 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 DPTQ07507 201 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 KRT31Q15323 416 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 SYCP1Q15431 976 aa9.02□□□□□ -0.97
SYNE2-209ENST00000553308 CRTC2Q53ET0 693 aaPredicted RBP9.02□□□□□ -0.97
SYNE2-209ENST00000553308 PPP6R3Q5H9R7 873 aaPredicted RBP9.02□□□□□ -0.97
SYNE2-209ENST00000553308 ERMARDQ5T6L9 678 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms