RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 HEATR4Q86WZ0 1026 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 NAXDQ8IW45 347 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 NRSN1Q8IZ57 195 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 RBFAQ8N0V3 343 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 TTC30BQ8N4P2 665 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 PDCD7Q8N8D1 485 aaKnown RBP14.07□□□□□ -0.16
PTCH1-226ENST00000553011 GPR26Q8NDV2 337 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 ACTRT1Q8TDG2 376 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 BLOC1S5Q8TDH9 187 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 SETD7Q8WTS6 366 aaKnown RBP14.07□□□□□ -0.16
PTCH1-226ENST00000553011 WDR92Q96MX6 357 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 SRPK1Q96SB4 655 aaKnown RBP14.07□□□□□ -0.16
PTCH1-226ENST00000553011 TCEAL2Q9H3H9 227 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-226ENST00000553011 ETNK1Q9HBU6 452 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 HOMER3Q9NSC5 361 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 UCKL1Q9NWZ5 548 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 PKD2L2Q9NZM6 624 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 ASXL3Q9C0F0 2248 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 CTAGE9A4FU28 777 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 TMEM202A6NGA9 273 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 CACNB4O00305 520 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-226ENST00000553011 CES2O00748 559 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 GIPC1O14908 333 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 SCAMP1O15126 338 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 FLRT2O43155 660 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 BUD23O43709 281 aaKnown RBP14.06□□□□□ -0.16
PTCH1-226ENST00000553011 PIAS2O75928 621 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 CSF2P04141 144 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 NME1P15531 152 aaKnown RBP14.06□□□□□ -0.16
PTCH1-226ENST00000553011 JUNDP17535 347 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 HTR1BP28222 390 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 ACTN2P35609 894 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 FDFT1P37268 417 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 CDK3Q00526 305 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 SUZ12Q15022 739 aaKnown RBP14.06□□□□□ -0.16
PTCH1-226ENST00000553011 ALG11Q2TAA5 492 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 GSTA5Q7RTV2 222 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 RAVER1Q8IY67 606 aaKnown RBP14.06□□□□□ -0.16
PTCH1-226ENST00000553011 TSACCQ96A04 125 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-226ENST00000553011 MAGOHBQ96A72 148 aaKnown RBP14.06□□□□□ -0.16
PTCH1-226ENST00000553011 CAPZA3Q96KX2 299 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 NAP1L3Q99457 506 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-226ENST00000553011 TEX101Q9BY14 249 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 FAM83DQ9H4H8 585 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 TRABDQ9H4I3 376 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 LRRC40Q9H9A6 602 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 FGF22Q9HCT0 170 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 BPIFA1Q9NP55 256 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 PHPT1Q9NRX4 125 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-226ENST00000553011 HACD3Q9P035 362 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 PAK5Q9P286 719 aa14.06□□□□□ -0.16
PTCH1-226ENST00000553011 RP1P56715 2156 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 RGSL1A5PLK6 1076 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 FADS2P1A8MWK0 482 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 INPP4BO15327 924 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 KCNK5O95279 499 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 AP2A1O95782 977 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 HOXC4P09017 264 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-226ENST00000553011 MYCLP1P12525 358 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-226ENST00000553011 BPIP17213 487 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 CSRP1P21291 193 aaKnown RBP14.05□□□□□ -0.16
PTCH1-226ENST00000553011 DGKAP23743 735 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 TEAD1P28347 426 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 NOVA1P51513 510 aaKnown RBP14.05□□□□□ -0.16
PTCH1-226ENST00000553011 HNRNPKP61978 463 aaKnown RBP eCLIP14.05□□□□□ -0.16
PTCH1-226ENST00000553011 PPARDQ03181 441 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 MSLNQ13421 630 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-226ENST00000553011 PTPRCAPQ14761 206 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 CYP1B1Q16678 543 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 HENMT1Q5T8I9 393 aaKnown RBP14.05□□□□□ -0.16
PTCH1-226ENST00000553011 PSAPL1Q6NUJ1 521 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 ADAMTSL4Q6UY14 1074 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 GLT6D1Q7Z4J2 308 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 TRIM74Q86UV6 250 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 NLRP8Q86W28 1048 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 HID1Q8IV36 788 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 PHACTR4Q8IZ21 702 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 SLC25A45Q8N413 288 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 RHBDD1Q8TEB9 315 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 OR1E3Q8WZA6 343 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 PDXPQ96GD0 296 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 ARNT2Q9HBZ2 717 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 MRPL40Q9NQ50 206 aaKnown RBP14.05□□□□□ -0.16
PTCH1-226ENST00000553011 RAB6BQ9NRW1 208 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 PIH1D1Q9NWS0 290 aaKnown RBP14.05□□□□□ -0.16
PTCH1-226ENST00000553011 IL17CQ9P0M4 197 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 KLQ9UEF7 1012 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 APOBEC3BQ9UH17 382 aaKnown RBP14.05□□□□□ -0.16
PTCH1-226ENST00000553011 PCOLCE2Q9UKZ9 415 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 KCTD3Q9Y597 815 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 SAR1BQ9Y6B6 198 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 COL5A1P20908 1838 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-226ENST00000553011 KNTC1P50748 2209 aa14.05□□□□□ -0.16
PTCH1-226ENST00000553011 PIKFYVEQ9Y2I7 2098 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 H3BM21 787 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 PSMD3O43242 534 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 CBFA2T3O75081 653 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 TPH1P17752 444 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 HMGCLP35914 325 aa14.04□□□□□ -0.16
PTCH1-226ENST00000553011 COILP38432 576 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms