RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 SCIMPQ6UWF3 145 aa12.35□□□□□ -0.43
HDAC7-230ENST00000552960 DCDC5Q6ZRR9 648 aa12.35□□□□□ -0.43
HDAC7-230ENST00000552960 LINC00523Q86TU6 105 aa12.35□□□□□ -0.43
HDAC7-230ENST00000552960 PPP1R14BQ96C90 147 aa12.35□□□□□ -0.43
HDAC7-230ENST00000552960 C19orf60Q96EN9 201 aa12.35□□□□□ -0.43
HDAC7-230ENST00000552960 FANCEQ9HB96 536 aa12.35□□□□□ -0.43
HDAC7-230ENST00000552960 CCM2LQ9NUG4 571 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-230ENST00000552960 TMEM30AQ9NV96 361 aa12.35□□□□□ -0.43
HDAC7-230ENST00000552960 SRRDQ9UH36 339 aa12.35□□□□□ -0.43
HDAC7-230ENST00000552960 CORINQ9Y5Q5 1042 aa12.35□□□□□ -0.43
HDAC7-230ENST00000552960 M0QZ92 97 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 ITGB1P05556 798 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 LINC00032P0C843 101 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 VEGFBP49765 207 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 EIF2B2P49770 351 aaKnown RBP12.34□□□□□ -0.43
HDAC7-230ENST00000552960 KPNA1P52294 538 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-230ENST00000552960 GRB7Q14451 532 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 PERM1Q5SV97 790 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 TMEM214Q6NUQ4 689 aaKnown RBP12.34□□□□□ -0.43
HDAC7-230ENST00000552960 PIM3Q86V86 326 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 SLC15A3Q8IY34 581 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 SLC15A4Q8N697 577 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 TOP1MTQ969P6 601 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 RNF145Q96MT1 663 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 PPP1R10Q96QC0 940 aaKnown RBP12.34□□□□□ -0.43
HDAC7-230ENST00000552960 TRIM15Q9C019 465 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 MEAF6Q9HAF1 191 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 MID1IP1Q9NPA3 183 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 TBCCD1Q9NVR7 557 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 USP22Q9UPT9 525 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 NDUFAF1Q9Y375 327 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 TRIM17Q9Y577 477 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 NCAM2O15394 837 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 B4GALT3O60512 393 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 CRCPO75575 148 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 BCL10O95999 233 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 CAPN3P20807 821 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 MYF6P23409 242 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 ARNTP27540 789 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 KCNC1P48547 511 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 CDC42EP1Q00587 391 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 IRF5Q13568 498 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 CYP2A13Q16696 494 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 CCDC92Q53HC0 331 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-230ENST00000552960 CRYBG2Q8N1P7 616 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 ATPAF2Q8N5M1 289 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 RAET1EQ8TD07 263 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 TRPC4APQ8TEL6 797 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 CENPNQ96H22 339 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-230ENST00000552960 FAR2Q96K12 515 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 TMEM74Q96NL1 305 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 COLEC11Q9BWP8 271 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 DGCR6LQ9BY27 220 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 MAP10Q9P2G4 905 aa12.34□□□□□ -0.43
HDAC7-230ENST00000552960 ZFC3H1O60293 1989 aaKnown RBP12.34□□□□□ -0.43
HDAC7-230ENST00000552960 ARPC2O15144 300 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 MTSS1O43312 755 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 STAU1O95793 577 aaKnown RBP12.33□□□□□ -0.43
HDAC7-230ENST00000552960 MOCS2O96007 188 aaPredicted RBP12.33□□□□□ -0.43
HDAC7-230ENST00000552960 FYNP06241 537 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 LTA4HP09960 611 aaKnown RBP12.33□□□□□ -0.43
HDAC7-230ENST00000552960 KCNE1P15382 129 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 PAMP19021 973 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 AXLP30530 894 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 TAF6P49848 677 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 ACLYP53396 1101 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 ECT2LQ008S8 904 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 MBTPS1Q14703 1052 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 XKR4Q5GH76 650 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 TECRLQ5HYJ1 363 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 CLEC20AQ6ZU45 233 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 GPRIN1Q7Z2K8 1008 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 SEPT8Q92599 483 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 WDR6Q9NNW5 1121 aaKnown RBP12.33□□□□□ -0.43
HDAC7-230ENST00000552960 IGSF5Q9NSI5 407 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 RBM22Q9NW64 420 aaKnown RBP eCLIP12.33□□□□□ -0.434e-7■■■■■ 34.8
HDAC7-230ENST00000552960 NUDT5Q9UKK9 219 aa12.33□□□□□ -0.43
HDAC7-230ENST00000552960 TTC24A2A3L6 582 aaPredicted RBP12.33□□□□□ -0.44
HDAC7-230ENST00000552960 OR51F1A6NGY5 319 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 CFAP99D6REC4 459 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 HGFP14210 728 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 CCNA2P20248 432 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 MATN1P21941 496 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 CDH3P22223 829 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 EEF1DP29692 281 aaKnown RBP12.33□□□□□ -0.44
HDAC7-230ENST00000552960 NFYCQ13952 458 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 SNX29P2Q8IUI4 249 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 LRRC52Q8N7C0 313 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 ADAM2Q99965 735 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 IFT80Q9P2H3 777 aaPredicted RBP12.33□□□□□ -0.44
HDAC7-230ENST00000552960 AAR2Q9Y312 384 aaKnown RBP12.33□□□□□ -0.44
HDAC7-230ENST00000552960 A0A087X1B8 175 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 TOR1BO14657 336 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 PIP5K1BO14986 540 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 MAN1A2O60476 641 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 ALBP02768 609 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 HOXD12P35452 270 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 BRCC3P46736 316 aa12.33□□□□□ -0.44
HDAC7-230ENST00000552960 RPS9P46781 194 aaKnown RBP12.33□□□□□ -0.44
HDAC7-230ENST00000552960 BCAP31P51572 246 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms