RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 APODP05090 189 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 F7P08709 466 aaPredicted RBP11.25□□□□□ -0.61
CACNB3-224ENST00000552812 ZNF30P17039 623 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 MC4RP32245 332 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 ABCG1P45844 678 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 TTPAP49638 278 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 SEC24CP53992 1094 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 SLC12A2P55011 1212 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 PEX6Q13608 980 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 ELAVL3Q14576 367 aaKnown RBP11.25□□□□□ -0.61
CACNB3-224ENST00000552812 ZNF234Q14588 700 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 PTPRRQ15256 657 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 DBN1Q16643 649 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 ZNF805Q5CZA5 627 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 ZDHHC20Q5W0Z9 365 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 CLEC14AQ86T13 490 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 GPATCH11Q8N954 259 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 BCAS4Q8TDM0 211 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 CHFRQ96EP1 664 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 ELMO2Q96JJ3 720 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 CAB39LQ9H9S4 337 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 TLK1Q9UKI8 766 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 SCN8AQ9UQD0 1980 aa11.25□□□□□ -0.61
CACNB3-224ENST00000552812 UPK3BL1B0FP48 263 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 UPK3BL2E5RIL1 263 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 NPC1O15118 1278 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 CLDN7O95471 211 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 CTSLP07711 333 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 SLC35E2BP0CK96 405 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 CYP2A6P11509 494 aaPredicted RBP11.24□□□□□ -0.61
CACNB3-224ENST00000552812 SERPINB4P48594 390 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 XIAPP98170 497 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 CACNG1Q06432 222 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 SEMA3AQ14563 771 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 CCDC153Q494R4 210 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 ZNF789Q5FWF6 425 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 PPM1JQ5JR12 505 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 FAM45BPQ6NSW5 357 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 CRTC1Q6UUV9 634 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 SERPINA13PQ6UXR4 307 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 CERS6Q6ZMG9 384 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 RAPH1Q70E73 1250 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 ACVR1CQ8NER5 493 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 TMIEQ8NEW7 156 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 FAM45AQ8TCE6 357 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 CSGALNACT1Q8TDX6 532 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 OR8D1Q8WZ84 308 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.24□□□□□ -0.61
CACNB3-224ENST00000552812 CCT8L2Q96SF2 557 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 OMDQ99983 421 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 BPIFA1Q9NP55 256 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 TRPV5Q9NQA5 729 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 THAP10Q9P2Z0 257 aaPredicted RBP11.24□□□□□ -0.61
CACNB3-224ENST00000552812 ACOT9Q9Y305 439 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 STARD13Q9Y3M8 1113 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 SLC30A1Q9Y6M5 507 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 C5orf42Q9H799 3197 aa11.24□□□□□ -0.61
CACNB3-224ENST00000552812 A0A087X1B8 175 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 NDUFAB1O14561 156 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 BIRC5O15392 142 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 PLIN3O60664 434 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 BMP1P13497 986 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 HNRNPLP14866 589 aaKnown RBP eCLIP11.23□□□□□ -0.61
CACNB3-224ENST00000552812 SP100P23497 879 aaPredicted RBP11.23□□□□□ -0.61
CACNB3-224ENST00000552812 PPARGP37231 505 aaPredicted RBP11.23□□□□□ -0.61
CACNB3-224ENST00000552812 SPAM1P38567 509 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 ADARP55265 1226 aaKnown RBP11.23□□□□□ -0.61
CACNB3-224ENST00000552812 TAS2R39P59534 338 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 SMAD4Q13485 552 aaKnown RBP11.23□□□□□ -0.61
CACNB3-224ENST00000552812 RBM20Q5T481 1227 aaKnown RBP11.23□□□□□ -0.61
CACNB3-224ENST00000552812 C9orf64Q5T6V5 341 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 N4BP2L1Q5TBK1 243 aaPredicted RBP11.23□□□□□ -0.61
CACNB3-224ENST00000552812 HECTD2Q5U5R9 776 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 LRRC66Q68CR7 880 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 LDB1Q86U70 411 aaPredicted RBP11.23□□□□□ -0.61
CACNB3-224ENST00000552812 SLC41A1Q8IVJ1 513 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 TRIM42Q8IWZ5 723 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 STK40Q8N2I9 435 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 TTC8Q8TAM2 541 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 LRRC8CQ8TDW0 803 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 TSNARE1Q96NA8 513 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 NSRP1Q9H0G5 558 aaKnown RBP11.23□□□□□ -0.61
CACNB3-224ENST00000552812 C12orf65Q9H3J6 166 aaKnown RBP11.23□□□□□ -0.61
CACNB3-224ENST00000552812 POPDC3Q9HBV1 291 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 B4GALT6Q9UBX8 382 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 VWA7Q9Y334 891 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 A0A0U1RQS6 177 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 TCP11X1B4DZS4 312 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 H3BQ06 376 aaPredicted RBP11.23□□□□□ -0.61
CACNB3-224ENST00000552812 PHGDHO43175 533 aaKnown RBP11.23□□□□□ -0.61
CACNB3-224ENST00000552812 NDUFS3O75489 264 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 SRP72O76094 671 aaKnown RBP11.23□□□□□ -0.61
CACNB3-224ENST00000552812 PRAMEF1O95521 474 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 APOA4P06727 396 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 VIMP08670 466 aaKnown RBP11.23□□□□□ -0.61
CACNB3-224ENST00000552812 BPIP17213 487 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 TAC1P20366 129 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 ITGALP20701 1170 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 SAT1P21673 171 aa11.23□□□□□ -0.61
CACNB3-224ENST00000552812 LHCGRP22888 699 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms