RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 SLC30A9Q6PML9 568 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 TMCO3Q6UWJ1 677 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 USP45Q70EL2 814 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 VASH2Q86V25 355 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 BPHLQ86WA6 291 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-217ENST00000552801 HEATR4Q86WZ0 1026 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 ZFAND4Q86XD8 727 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 VSTM4Q8IW00 320 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 NRSN1Q8IZ57 195 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 MCOLN2Q8IZK6 566 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 ATPAF2Q8N5M1 289 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 PLA2G15Q8NCC3 412 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 KIF18AQ8NI77 898 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 TRIM11Q96F44 468 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 ZNF599Q96NL3 588 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 CDH19Q9H159 772 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 PDFQ9HBH1 243 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 RDH14Q9HBH5 336 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 MRPL47Q9HD33 250 aaKnown RBP8.7□□□□□ -1.02
TMEM116-217ENST00000552801 FAM53CQ9NYF3 392 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 FKBPLQ9UIM3 349 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 SCINQ9Y6U3 715 aa8.7□□□□□ -1.02
TMEM116-217ENST00000552801 COL27A1Q8IZC6 1860 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-217ENST00000552801 HGSO14964 777 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-217ENST00000552801 EPHB6O15197 1021 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 CASC3O15234 703 aaKnown RBP8.69□□□□□ -1.02
TMEM116-217ENST00000552801 ARHGAP6O43182 974 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 SOCS5O75159 536 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 FAM87AP0C7U9 286 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 CCNB1P14635 433 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 CA4P22748 312 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 SERPINB6P35237 376 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 SSR1P43307 286 aaKnown RBP8.69□□□□□ -1.02
TMEM116-217ENST00000552801 GPR1P46091 355 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 CSRP3P50461 194 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 MAZP56270 477 aaKnown RBP8.69□□□□□ -1.02
TMEM116-217ENST00000552801 OR1D5P58170 312 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 DMTNQ08495 405 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 TBX2Q13207 712 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-217ENST00000552801 HLTFQ14527 1009 aaKnown RBP eCLIP8.69□□□□□ -1.02
TMEM116-217ENST00000552801 ARTNQ5T4W7 220 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 AFMIDQ63HM1 303 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 OGFOD3Q6PK18 319 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 FAM129CQ86XR2 697 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 PSTKQ8IV42 348 aaKnown RBP8.69□□□□□ -1.02
TMEM116-217ENST00000552801 AGBL5Q8NDL9 886 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 JPH3Q8WXH2 748 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-217ENST00000552801 KIAA1143Q96AT1 154 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-217ENST00000552801 ZNF653Q96CK0 615 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 TAAR9Q96RI9 348 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 SLC38A3Q99624 504 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 DPYSL5Q9BPU6 564 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 SNRNP25Q9BV90 132 aaKnown RBP8.69□□□□□ -1.02
TMEM116-217ENST00000552801 ASPSCR1Q9BZE9 553 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 TRIM4Q9C037 500 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 TRNAU1APQ9NX07 287 aaKnown RBP8.69□□□□□ -1.02
TMEM116-217ENST00000552801 KCNK4Q9NYG8 393 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 TAAR2Q9P1P5 351 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 MYO1AQ9UBC5 1043 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 B4GALT6Q9UBX8 382 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 ACSL6Q9UKU0 697 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 PHTF1Q9UMS5 762 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 SIK3Q9Y2K2 1263 aa8.69□□□□□ -1.02
TMEM116-217ENST00000552801 NOBOXO60393 691 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 SLU7O95391 586 aaKnown RBP8.68□□□□□ -1.02
TMEM116-217ENST00000552801 ASMTLO95671 621 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 ECEL1O95672 775 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 PYGLP06737 847 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 MIPP30301 263 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 ACTR1BP42025 376 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 MMP13P45452 471 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 GPR3P46089 330 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 RGRP47804 291 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 ACTR1AP61163 376 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 ZFP36L1Q07352 338 aaKnown RBP8.68□□□□□ -1.02
TMEM116-217ENST00000552801 RALGDSQ12967 914 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 MAMLD1Q13495 774 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 TRA2AQ13595 282 aaKnown RBP eCLIP8.68□□□□□ -1.02
TMEM116-217ENST00000552801 KRT81Q14533 505 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 DCAF12Q5T6F0 453 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 ARMC12Q5T9G4 340 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 MARC1Q5VT66 337 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 ZSWIM9Q86XI8 627 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 GALNT13Q8IUC8 556 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 TMEM139Q8IV31 216 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 RCBTB1Q8NDN9 531 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 OR10G6Q8NH81 332 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 CCL4L1Q8NHW4 92 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 GPBAR1Q8TDU6 330 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 HSPH1Q92598 858 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 ECHDC3Q96DC8 303 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 CCDC74BQ96LY2 380 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 PSKH2Q96QS6 385 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 ERGIC2Q96RQ1 377 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 KCTD15Q96SI1 283 aaPredicted RBP8.68□□□□□ -1.02
TMEM116-217ENST00000552801 LGR4Q9BXB1 951 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 B3GNT4Q9C0J1 378 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 SEMA6CQ9H3T2 930 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 SLC39A1Q9NY26 324 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 OGFRQ9NZT2 677 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms