RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 PHTF1Q9UMS5 762 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 PCDHGC4Q9Y5F7 938 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 SPENQ96T58 3664 aaKnown RBP14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 PRKAR1AP10644 381 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 GPR1P46091 355 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 FASLGP48023 281 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 ZNF135P52742 658 aaPredicted RBP14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 DPTQ07507 201 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 SLC10A7Q0GE19 358 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 CDC20Q12834 499 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 LRP8Q14114 963 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 KRT31Q15323 416 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 CA9Q16790 459 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 PPP6R3Q5H9R7 873 aaPredicted RBP14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 PPP1R2P3Q6NXS1 205 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 USP45Q70EL2 814 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 KDELC2Q7Z4H8 507 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 HSD11B1LQ7Z5J1 315 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 MCOLN2Q8IZK6 566 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 BBS5Q8N3I7 341 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 FAM26EQ8N5C1 309 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 LZTR1Q8N653 840 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 NPWQ8N729 165 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 BMPERQ8N8U9 685 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 PTCD2Q8WV60 388 aaKnown RBP14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 RTP4Q96DX8 246 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 NUDCD1Q96RS6 583 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 KCTD15Q96SI1 283 aaPredicted RBP14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 TRIT1Q9H3H1 467 aaKnown RBP14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 STN1Q9H668 368 aaKnown RBP14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 PARVAQ9NVD7 372 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 PDP2Q9P2J9 529 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 PCSK1NQ9UHG2 260 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 ST14Q9Y5Y6 855 aa14.13□□□□□ -0.15
CHMP1A-210ENST00000551981 CLEC18AA5D8T8 446 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 PRPSAP2O60256 369 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 PYGLP06737 847 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 CCDC172P0C7W6 258 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 LHCGRP22888 699 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 MC2RQ01718 297 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 OGDHQ02218 1023 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 ABHD18Q0P651 414 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 LACTB2Q53H82 288 aaPredicted RBP14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 RALGPS1Q5JS13 557 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 SNAP47Q5SQN1 464 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 ACAD10Q6JQN1 1059 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 WDR74Q6RFH5 385 aaPredicted RBP14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 CLEC18BQ6UXF7 455 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 ADAMTSL4Q6UY14 1074 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 Q6ZVL8 140 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 GALNT13Q8IUC8 556 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 PSTKQ8IV42 348 aaKnown RBP14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 NDUFAF2Q8N183 169 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 CBARPQ8N350 705 aaPredicted RBP14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 CLEC18CQ8NCF0 446 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 NSMCE1Q8WV22 266 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 SCRN2Q96FV2 425 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 SCARF2Q96GP6 870 aaPredicted RBP14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 NSMCE3Q96MG7 304 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 CTRCQ99895 268 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 SNRNP25Q9BV90 132 aaKnown RBP14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 MAN2B2Q9Y2E5 1009 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 SIK3Q9Y2K2 1263 aa14.12□□□□□ -0.15
CHMP1A-210ENST00000551981 SPTBN1Q01082 2364 aaKnown RBP14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 LOC101059948A0A1B0GTJ6 334 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 TTC24A2A3L6 582 aaPredicted RBP14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 NPIPB15A6NHN6 443 aaPredicted RBP14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 A8MU76 341 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 RNF8O76064 485 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 HCAR3P49019 387 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 COPB1P53618 953 aaKnown RBP14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 DEFB109BQ30KR1 87 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 PYCR3Q53H96 274 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 ARMC12Q5T9G4 340 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 CDKAL1Q5VV42 579 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 ATCAYQ86WG3 371 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 ZNF761Q86XN6 746 aaPredicted RBP14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 SFRP1Q8N474 314 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 ANKRD20A12PQ8NF67 263 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 ENOX1Q8TC92 643 aaKnown RBP14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 SLC37A2Q8TED4 501 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 STARD8Q92502 1023 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 SH3KBP1Q96B97 665 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 AP2M1Q96CW1 435 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 ABHD17AQ96GS6 310 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 MCCC1Q96RQ3 725 aaPredicted RBP14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 NUP62CLQ9H1M0 184 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 ZWILCHQ9H900 591 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 NOD2Q9HC29 1040 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 FBXO8Q9NRD0 319 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 TMEM98Q9Y2Y6 226 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 PLEKHM1Q9Y4G2 1056 aa14.11□□□□□ -0.15
CHMP1A-210ENST00000551981 TRBV23OR9-2A0A075B6M9 112 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 STK17BO94768 372 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 PGLSO95336 258 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 MAP3K6O95382 1288 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 TCN2P20062 427 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 OAS2P29728 719 aaKnown RBP14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 HHEXQ03014 270 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 KLRB1Q12918 225 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms