RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 UGT1A5P35504 534 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 HSPA7P48741 367 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 MTA1Q13330 715 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 RIPK1Q13546 671 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 P3H2Q8IVL5 708 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 FBXW8Q8N3Y1 598 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 ATG16L2Q8NAA4 619 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 WDR60Q8WVS4 1066 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 TSSK3Q96PN8 268 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 OSBPL2Q9H1P3 480 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 NKX1-2Q9UD57 310 aaPredicted RBP14.98□□□□□ -0.01
CUX1-214ENST00000550008 SLC7A8Q9UHI5 535 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 IL10RBQ08334 325 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 ERAP2Q6P179 960 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 PAOXQ6QHF9 649 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 PAQR3Q6TCH7 311 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 NECAB2Q7Z6G3 386 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 SIDT2Q8NBJ9 832 aaKnown RBP14.97□□□□□ -0.01
CUX1-214ENST00000550008 SPPL2AQ8TCT8 520 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 TPD52L3Q96J77 140 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 ROGDIQ9GZN7 287 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 DYRK1BQ9Y463 629 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 SCN7AQ01118 1682 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 A0A0D9SEW6 157 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 STX16-NPEPL1H3BU86 382 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 TIPRLO75663 272 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 HAPLN1P10915 354 aaPredicted RBP14.97□□□□□ -0.01
CUX1-214ENST00000550008 NDST2P52849 883 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 POLR2LP62875 67 aaKnown RBP14.97□□□□□ -0.01
CUX1-214ENST00000550008 NEDD8Q15843 81 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 ZNF598Q86UK7 904 aaKnown RBP14.97□□□□□ -0.01
CUX1-214ENST00000550008 RALGPS2Q86X27 583 aaPredicted RBP14.97□□□□□ -0.01
CUX1-214ENST00000550008 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.97□□□□□ -0.016e-7■■■■■ 139.2
CUX1-214ENST00000550008 ITFG1Q8TB96 612 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 STYXQ8WUJ0 223 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 ATG10Q9H0Y0 220 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 RERGLQ9H628 205 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 STN1Q9H668 368 aaKnown RBP14.97□□□□□ -0.01
CUX1-214ENST00000550008 RNF186Q9NXI6 227 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 INVSQ9Y283 1065 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 Q9Y3F1 56 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 FAM149AA5PLN7 773 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 PTGES3LE9PB15 166 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 DLX3O60479 287 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 ATP6V1C1P21283 382 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 HSPA13P48723 471 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 UBXN11Q5T124 520 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 C2orf73Q8N5S3 287 aaPredicted RBP14.97□□□□□ -0.01
CUX1-214ENST00000550008 TWIST2Q8WVJ9 160 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 ASB2Q96Q27 587 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 EIF2B4Q9UI10 523 aaKnown RBP14.97□□□□□ -0.01
CUX1-214ENST00000550008 GNPTGQ9UJJ9 305 aa14.97□□□□□ -0.01
CUX1-214ENST00000550008 TRIM38O00635 465 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 RGS14O43566 566 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 ALPIP09923 528 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 ALOX15P16050 662 aaPredicted RBP14.96□□□□□ -0.01
CUX1-214ENST00000550008 CCT8P50990 548 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 PRKG2Q13237 762 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 MAPKAPK3Q16644 382 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 MS4A13Q5J8X5 152 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 SIRPB2Q5JXA9 342 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 KIAA0930Q6ICG6 404 aaPredicted RBP14.96□□□□□ -0.01
CUX1-214ENST00000550008 ZFP1Q6P2D0 407 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 RNF19BQ6ZMZ0 732 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 CCDC149Q6ZUS6 474 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 ADAMTSL2Q86TH1 951 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 SYT12Q8IV01 421 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 MAGEH1Q9H213 219 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 EXOSC4Q9NPD3 245 aaKnown RBP14.96□□□□□ -0.01
CUX1-214ENST00000550008 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.96□□□□□ -0.01
CUX1-214ENST00000550008 POLR3HQ9Y535 204 aaPredicted RBP14.96□□□□□ -0.01
CUX1-214ENST00000550008 TNPO3Q9Y5L0 923 aaKnown RBP14.96□□□□□ -0.01
CUX1-214ENST00000550008 TUBGCP6Q96RT7 1819 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 A0A1W2PRU2 124 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 TRAFD1O14545 582 aaPredicted RBP14.96□□□□□ -0.01
CUX1-214ENST00000550008 COL6A2P12110 1019 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 VCLP18206 1134 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 CHI3L1P36222 383 aaPredicted RBP14.96□□□□□ -0.01
CUX1-214ENST00000550008 SERPINA13PQ6UXR4 307 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 CEP19Q96LK0 163 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 SMOC2Q9H3U7 446 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 LNPEPQ9UIQ6 1025 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 MTF2Q9Y483 593 aaPredicted RBP14.96□□□□□ -0.01
CUX1-214ENST00000550008 OR2AG2A6NM03 316 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 E7ESA3 106 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 ARVCFO00192 962 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 XYLBO75191 536 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 MLYCDO95822 493 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 GSNP06396 782 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 ETS2P15036 469 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 ATP6V0D1P61421 351 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 FAM98BQ52LJ0 330 aaKnown RBP14.96□□□□□ -0.01
CUX1-214ENST00000550008 KIAA0408Q6ZU52 694 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 DNAJB7Q7Z6W7 309 aaPredicted RBP14.96□□□□□ -0.01
CUX1-214ENST00000550008 RELL1Q8IUW5 271 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 ZNF366Q8N895 744 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 CLIC5Q9NZA1 410 aa14.96□□□□□ -0.01
CUX1-214ENST00000550008 GNEQ9Y223 722 aaKnown RBP14.96□□□□□ -0.01
CUX1-214ENST00000550008 TBX10O75333 385 aa14.96□□□□□ -0.02
CUX1-214ENST00000550008 GLUD1P00367 558 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms