RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 TMEM98Q9Y2Y6 226 aa15.73■□□□□ 0.11
DDX54-205ENST00000548786 PCDHGA1Q9Y5H4 931 aa15.73■□□□□ 0.11
DDX54-205ENST00000548786 USP24Q9UPU5 2620 aa15.73■□□□□ 0.11
DDX54-205ENST00000548786 PLXNB3Q9ULL4 1909 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 KCNN4O15554 427 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 MTSS1O43312 755 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 TJP3O95049 919 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 SOD1P00441 154 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 RBP3P10745 1247 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 JUPP14923 745 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 PTPN7P35236 360 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 CHRNA4P43681 627 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 WNT3AP56704 352 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 NR0B2Q15466 257 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 SMAD1Q15797 465 aaKnown RBP15.72■□□□□ 0.11
DDX54-205ENST00000548786 ST3GAL2Q16842 350 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 C6orf132Q5T0Z8 1188 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 CCNI2Q6ZMN8 369 aaPredicted RBP15.72■□□□□ 0.11
DDX54-205ENST00000548786 EFL1Q7Z2Z2 1120 aaKnown RBP15.72■□□□□ 0.11
DDX54-205ENST00000548786 TAF8Q7Z7C8 310 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 CDKL3Q8IVW4 592 aaPredicted RBP15.72■□□□□ 0.11
DDX54-205ENST00000548786 SFTPA2Q8IWL1 248 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 LRRC8AQ8IWT6 810 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 SLC35F3Q8IY50 421 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 GALNT15Q8N3T1 639 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 FSTL5Q8N475 847 aaPredicted RBP15.72■□□□□ 0.11
DDX54-205ENST00000548786 CCDC112Q8NEF3 446 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 CCHCR1Q8TD31 782 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 TADA1Q96BN2 335 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 LYSMD1Q96S90 227 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 TMEM121BQ9BXQ6 578 aaPredicted RBP15.72■□□□□ 0.11
DDX54-205ENST00000548786 TSGA10Q9BZW7 698 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 SYNDIG1Q9H7V2 258 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 FAM153AQ9UHL3 310 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 DNPEPQ9ULA0 475 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 GPR34Q9UPC5 381 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 ZNF711Q9Y462 761 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 SPO11Q9Y5K1 396 aa15.72■□□□□ 0.11
DDX54-205ENST00000548786 FREM2Q5SZK8 3169 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 TCRBV7S2A1N4TA0A589 114 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 MIF4GDA9UHW6 222 aaKnown RBP15.71■□□□□ 0.11
DDX54-205ENST00000548786 B4DGG1 531 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 PDE2AO00408 941 aaPredicted RBP15.71■□□□□ 0.11
DDX54-205ENST00000548786 CASC3O15234 703 aaKnown RBP15.71■□□□□ 0.11
DDX54-205ENST00000548786 KRT86O43790 486 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 NDST3O95803 873 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 FUCA1P04066 466 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 CEACAM5P06731 702 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 CCZ1BP86790 482 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 CCZ1P86791 482 aaPredicted RBP15.71■□□□□ 0.11
DDX54-205ENST00000548786 INSM1Q01101 510 aaPredicted RBP15.71■□□□□ 0.11
DDX54-205ENST00000548786 DPTQ07507 201 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 XRCC4Q13426 336 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 CCDC70Q6NSX1 233 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 KDELC1Q6UW63 502 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 GKN2Q86XP6 184 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 FAM181AQ8N9Y4 354 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 SCG3Q8WXD2 468 aaKnown RBP15.71■□□□□ 0.11
DDX54-205ENST00000548786 EID2BQ96D98 161 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 BOCQ9BWV1 1114 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 GPR63Q9BZJ6 419 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 GRPEL1Q9HAV7 217 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 ZFYVE1Q9HBF4 777 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 ARFGAP3Q9NP61 516 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 KCTD5Q9NXV2 234 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 PKD2L2Q9NZM6 624 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 SUFUQ9UMX1 484 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 R3HDM2Q9Y2K5 976 aaKnown RBP15.71■□□□□ 0.11
DDX54-205ENST00000548786 DGKBQ9Y6T7 804 aa15.71■□□□□ 0.11
DDX54-205ENST00000548786 TPP1O14773 563 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 AURKAO14965 403 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 ASMTLO95671 621 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 ATP1A1P05023 1023 aaKnown RBP15.7■□□□□ 0.1
DDX54-205ENST00000548786 HOXC4P09017 264 aaPredicted RBP15.7■□□□□ 0.1
DDX54-205ENST00000548786 CCDC175P0C221 793 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 TNNT3P45378 269 aaPredicted RBP15.7■□□□□ 0.1
DDX54-205ENST00000548786 SPINT3P49223 89 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 DUSP3P51452 185 aaPredicted RBP15.7■□□□□ 0.1
DDX54-205ENST00000548786 TARDBPQ13148 414 aaKnown RBP eCLIP15.7■□□□□ 0.12e-9■■■■■ 31.7
DDX54-205ENST00000548786 ILKQ13418 452 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 OLIG2Q13516 323 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 SIRPB2Q5JXA9 342 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 PERM1Q5SV97 790 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 ADAMTSL4Q6UY14 1074 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 ZNF765Q7L2R6 523 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 NRSN1Q8IZ57 195 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 TAB3Q8N5C8 712 aaPredicted RBP15.7■□□□□ 0.1
DDX54-205ENST00000548786 RNF10Q8N5U6 811 aaKnown RBP15.7■□□□□ 0.1
DDX54-205ENST00000548786 FAM46DQ8NEK8 389 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 CCDC110Q8TBZ0 833 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 MAPK15Q8TD08 544 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 ZCCHC14Q8WYQ9 949 aaKnown RBP15.7■□□□□ 0.1
DDX54-205ENST00000548786 HES6Q96HZ4 224 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 HIC2Q96JB3 615 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 MRGPRX2Q96LB1 330 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 TBATAQ96M53 351 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 FCRL5Q96RD9 977 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 WDR24Q96S15 920 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 VAT1Q99536 393 aa15.7■□□□□ 0.1
DDX54-205ENST00000548786 APOL2Q9BQE5 337 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms