RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 B3GNT4Q9C0J1 378 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 NOD2Q9HC29 1040 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 ETNK2Q9NVF9 386 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 DONSONQ9NYP3 566 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 CWC15Q9P013 229 aaKnown RBP16.42■□□□□ 0.22
SSH1-208ENST00000548522 CD84Q9UIB8 345 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 ZKSCAN5Q9Y2L8 839 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 TMEM98Q9Y2Y6 226 aa16.42■□□□□ 0.22
SSH1-208ENST00000548522 PCYT1BQ9Y5K3 369 aaPredicted RBP16.42■□□□□ 0.22
SSH1-208ENST00000548522 ZFC3H1O60293 1989 aaKnown RBP16.42■□□□□ 0.22
SSH1-208ENST00000548522 SOCS5O75159 536 aa16.41■□□□□ 0.22
SSH1-208ENST00000548522 EML2O95834 649 aa16.41■□□□□ 0.22
SSH1-208ENST00000548522 TCF4P15884 667 aa16.41■□□□□ 0.22
SSH1-208ENST00000548522 CTPS1P17812 591 aa16.41■□□□□ 0.22
SSH1-208ENST00000548522 ACTR1BP42025 376 aa16.41■□□□□ 0.22
SSH1-208ENST00000548522 ACTR1AP61163 376 aa16.41■□□□□ 0.22
SSH1-208ENST00000548522 UBXN1Q04323 297 aa16.41■□□□□ 0.22
SSH1-208ENST00000548522 KCNAB2Q13303 367 aa16.41■□□□□ 0.22
SSH1-208ENST00000548522 BIRC2Q13490 618 aa16.41■□□□□ 0.22
SSH1-208ENST00000548522 ZNF235Q14590 738 aa16.41■□□□□ 0.22
SSH1-208ENST00000548522 ANKS6Q68DC2 871 aa16.41■□□□□ 0.22
SSH1-208ENST00000548522 APTXQ7Z2E3 356 aaKnown RBP16.41■□□□□ 0.22
SSH1-208ENST00000548522 FAM129CQ86XR2 697 aa16.41■□□□□ 0.22
SSH1-208ENST00000548522 CACNA2D3Q8IZS8 1091 aa16.41■□□□□ 0.22
SSH1-208ENST00000548522 AGBL5Q8NDL9 886 aa16.41■□□□□ 0.22
SSH1-208ENST00000548522 OR4D9Q8NGE8 314 aa16.41■□□□□ 0.22
SSH1-208ENST00000548522 ZNF564Q8TBZ8 553 aaPredicted RBP16.41■□□□□ 0.22
SSH1-208ENST00000548522 TRBV23OR9-2A0A075B6M9 112 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.4■□□□□ 0.22
SSH1-208ENST00000548522 EFCAB7A8K855 629 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 SMTNL1A8MU46 457 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 DUX1O43812 170 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 RAD1O60671 282 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 LRCH4O75427 683 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 IVLP07476 585 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 TPM2P07951 284 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 GPR3P46089 330 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 CLPPQ16740 277 aaPredicted RBP16.4■□□□□ 0.22
SSH1-208ENST00000548522 PLEKHA7Q6IQ23 1121 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 MARK2Q7KZI7 788 aaKnown RBP16.4■□□□□ 0.22
SSH1-208ENST00000548522 LUZP1Q86V48 1076 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 UNC5BQ8IZJ1 945 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 BMPERQ8N8U9 685 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 SLC37A2Q8TED4 501 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 MRFAP1L1Q96HT8 127 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 NUDCD1Q96RS6 583 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 CTRCQ99895 268 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 MGME1Q9BQP7 344 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 DDA1Q9BW61 102 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 ZMYND15Q9H091 742 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 PARVAQ9NVD7 372 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 SLC39A1Q9NY26 324 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 KCNK4Q9NYG8 393 aa16.4■□□□□ 0.22
SSH1-208ENST00000548522 LIMA1Q9UHB6 759 aaKnown RBP16.4■□□□□ 0.22
SSH1-208ENST00000548522 TMEM191CA6NGB0 347 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 EIF3CLB5ME19 914 aaKnown RBP16.39■□□□□ 0.21
SSH1-208ENST00000548522 NKX2-8O15522 239 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 PRPSAP2O60256 369 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 ZNF500O60304 480 aaPredicted RBP16.39■□□□□ 0.21
SSH1-208ENST00000548522 PGLSO95336 258 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 PRKAR1AP10644 381 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 MSNP26038 577 aaKnown RBP16.39■□□□□ 0.21
SSH1-208ENST00000548522 IL1R2P27930 398 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 CSTF2P33240 577 aaKnown RBP eCLIP16.39■□□□□ 0.21
SSH1-208ENST00000548522 RENBPP51606 427 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 TPM4P67936 248 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 TRA2AQ13595 282 aaKnown RBP eCLIP16.39■□□□□ 0.21
SSH1-208ENST00000548522 IGFBP7Q16270 282 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 SMTNL2Q2TAL5 461 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 SNAP47Q5SQN1 464 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 IRF2BP2Q7Z5L9 587 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 TECPR1Q7Z6L1 1165 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 SCAMP4Q969E2 229 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 RNF31Q96EP0 1072 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 ZNF599Q96NL3 588 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 OR2M4Q96R27 311 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 ERGIC2Q96RQ1 377 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 MCCC1Q96RQ3 725 aaPredicted RBP16.39■□□□□ 0.21
SSH1-208ENST00000548522 AGAP2Q99490 1192 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 EIF3CQ99613 913 aaKnown RBP16.39■□□□□ 0.21
SSH1-208ENST00000548522 CDH19Q9H159 772 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 HSD3B7Q9H2F3 369 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 ADNPQ9H2P0 1102 aa16.39■□□□□ 0.21
SSH1-208ENST00000548522 A8MU76 341 aa16.38■□□□□ 0.21
SSH1-208ENST00000548522 MAFKO60675 156 aa16.38■□□□□ 0.21
SSH1-208ENST00000548522 MAP3K6O95382 1288 aa16.38■□□□□ 0.21
SSH1-208ENST00000548522 PDHA1P08559 390 aa16.38■□□□□ 0.21
SSH1-208ENST00000548522 FERP16591 822 aa16.38■□□□□ 0.21
SSH1-208ENST00000548522 DESP17661 470 aa16.38■□□□□ 0.21
SSH1-208ENST00000548522 AMPD1P23109 780 aa16.38■□□□□ 0.21
SSH1-208ENST00000548522 E4F1Q66K89 784 aaPredicted RBP16.38■□□□□ 0.21
SSH1-208ENST00000548522 LRRC66Q68CR7 880 aa16.38■□□□□ 0.21
SSH1-208ENST00000548522 NRSN1Q8IZ57 195 aa16.38■□□□□ 0.21
SSH1-208ENST00000548522 SCARF2Q96GP6 870 aaPredicted RBP16.38■□□□□ 0.21
SSH1-208ENST00000548522 ABCG8Q9H221 673 aa16.38■□□□□ 0.21
SSH1-208ENST00000548522 ZNF71Q9NQZ8 489 aaPredicted RBP16.38■□□□□ 0.21
SSH1-208ENST00000548522 PILRAQ9UKJ1 303 aa16.38■□□□□ 0.21
SSH1-208ENST00000548522 PHTF1Q9UMS5 762 aa16.38■□□□□ 0.21
SSH1-208ENST00000548522 PRKAB1Q9Y478 270 aa16.38■□□□□ 0.21
SSH1-208ENST00000548522 UTP20O75691 2785 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms