RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 CYB5D1Q6P9G0 228 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 HTR3DQ70Z44 454 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 UBE2Q1Q7Z7E8 422 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 SPATS2Q86XZ4 545 aaKnown RBP11.94□□□□□ -0.5
CCDC38-202ENST00000546386 CCDC117Q8IWD4 279 aaPredicted RBP11.94□□□□□ -0.5
CCDC38-202ENST00000546386 VN1R2Q8NFZ6 395 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 SLC7A6OSQ96CW6 309 aaPredicted RBP11.94□□□□□ -0.5
CCDC38-202ENST00000546386 KCNA7Q96RP8 456 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 ITM2BQ9Y287 266 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 LTBP2Q14767 1821 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 ALPK3Q96L96 1907 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 EFCAB14O75071 495 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 FSBPO95073 299 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 KLHL2O95198 593 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 TRIM16O95361 564 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 MPOP05164 745 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 CDC25CP30307 473 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 WASP42768 502 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 ZNF140P52738 457 aaPredicted RBP11.93□□□□□ -0.5
CCDC38-202ENST00000546386 PPP1R3AQ16821 1122 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 PLA2G4EQ3MJ16 856 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 RIPOR1Q6ZS17 1223 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 TRIM67Q6ZTA4 783 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 CHST9Q7L1S5 443 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 CNTN4Q8IWV2 1026 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 KLHDC8BQ8IXV7 354 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 ACMSDQ8TDX5 336 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 SMG7Q92540 1137 aaKnown RBP11.93□□□□□ -0.5
CCDC38-202ENST00000546386 SCAMP4Q969E2 229 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 FAM167BQ9BTA0 163 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 TBC1D10AQ9BXI6 508 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 PRKD2Q9BZL6 878 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.93□□□□□ -0.5
CCDC38-202ENST00000546386 MED16Q9Y2X0 877 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 ASB1Q9Y576 335 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 CRTAMO95727 393 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 GUCA1CO95843 209 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 MAGEA12P43365 314 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 ELF3P78545 371 aaPredicted RBP11.93□□□□□ -0.5
CCDC38-202ENST00000546386 CBLBQ13191 982 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 GRM2Q14416 872 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 TSNQ15631 228 aaKnown RBP11.93□□□□□ -0.5
CCDC38-202ENST00000546386 UGP2Q16851 508 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 LACTB2Q53H82 288 aaPredicted RBP11.93□□□□□ -0.5
CCDC38-202ENST00000546386 RARS2Q5T160 578 aaKnown RBP11.93□□□□□ -0.5
CCDC38-202ENST00000546386 LONP2Q86WA8 852 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 CPNE9Q8IYJ1 553 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 LSMEM2Q8N112 164 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 EEF1AKMT1Q8WVE0 214 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 ADGRE3Q9BY15 652 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 MFSD1Q9H3U5 465 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 NCKIPSDQ9NZQ3 722 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 PRSS21Q9Y6M0 314 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 PIKFYVEQ9Y2I7 2098 aa11.93□□□□□ -0.5
CCDC38-202ENST00000546386 SLC7A4O43246 635 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 ENTPD5O75356 428 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 PRAMEF1O95521 474 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 CYBBP04839 570 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 LPOP22079 712 aaPredicted RBP11.92□□□□□ -0.5
CCDC38-202ENST00000546386 HNRNPH1P31943 449 aaKnown RBP11.92□□□□□ -0.5
CCDC38-202ENST00000546386 MAGEA10P43363 369 aaPredicted RBP11.92□□□□□ -0.5
CCDC38-202ENST00000546386 CCNHP51946 323 aaPredicted RBP11.92□□□□□ -0.5
CCDC38-202ENST00000546386 STC1P52823 247 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 SLC7A9P82251 487 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 MXRA7P84157 204 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 SLC25A3Q00325 362 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 MPPE1Q53F39 396 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 SPDYAQ5MJ70 313 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 RETSATQ6NUM9 610 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 ISCA2Q86U28 154 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 PIH1D2Q8WWB5 315 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 IRF7Q92985 503 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 SKA1Q96BD8 255 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 ZNF707Q96C28 371 aaPredicted RBP11.92□□□□□ -0.5
CCDC38-202ENST00000546386 MYO19Q96H55 970 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 C7orf26Q96N11 449 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 CDK15Q96Q40 435 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 KLC4Q9NSK0 619 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 PLA2G4CQ9UP65 541 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 NPEPPSL1A6NEC2 478 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 UBFD1O14562 309 aaKnown RBP11.92□□□□□ -0.5
CCDC38-202ENST00000546386 DCTN3O75935 186 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 NQO1P15559 274 aaKnown RBP11.92□□□□□ -0.5
CCDC38-202ENST00000546386 CCDC153Q494R4 210 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 SETMARQ53H47 684 aaPredicted RBP11.92□□□□□ -0.5
CCDC38-202ENST00000546386 MRNIPQ6NTE8 343 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 PSRC1Q6PGN9 363 aaPredicted RBP11.92□□□□□ -0.5
CCDC38-202ENST00000546386 CCDC91Q7Z6B0 441 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 RNF148Q8N7C7 305 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 HIPK4Q8NE63 616 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 GIMAP7Q8NHV1 300 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 LKAAEAR1Q8TD35 194 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 KLHL32Q96NJ5 620 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 CATSPER2Q96P56 530 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 DDX50Q9BQ39 737 aaKnown RBP11.92□□□□□ -0.5
CCDC38-202ENST00000546386 NKX2-4Q9H2Z4 354 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 ASB8Q9H765 288 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 ZFYVE1Q9HBF4 777 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 SEMA4BQ9NPR2 832 aaPredicted RBP11.92□□□□□ -0.5
CCDC38-202ENST00000546386 SPHK2Q9NRA0 654 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms