RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 ZNF235Q14590 738 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 SMTNL2Q2TAL5 461 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 AMZ1Q400G9 498 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 PYCR3Q53H96 274 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 RALGPS1Q5JS13 557 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.51□□□□□ -0.41
COPS7A-221ENST00000546229 NKAIN2Q5VXU1 208 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 PPP1R2P3Q6NXS1 205 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 ZNF765Q7L2R6 523 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 TRIM74Q86UV6 250 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 NIPA2Q8N8Q9 360 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 SLC37A2Q8TED4 501 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 PCMTD1Q96MG8 357 aaPredicted RBP12.51□□□□□ -0.41
COPS7A-221ENST00000546229 AGAP2Q99490 1192 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 DDA1Q9BW61 102 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 ISCUQ9H1K1 167 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 ABCG8Q9H221 673 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 PCDH18Q9HCL0 1135 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 ANO10Q9NW15 660 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 GEMIN8Q9NWZ8 242 aaKnown RBP12.51□□□□□ -0.41
COPS7A-221ENST00000546229 KCTD5Q9NXV2 234 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 CNOT8Q9UFF9 292 aaKnown RBP12.51□□□□□ -0.41
COPS7A-221ENST00000546229 IL17BQ9UHF5 180 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 PHTF1Q9UMS5 762 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 B3GALT1Q9Y5Z6 326 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 PRLP01236 227 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 FTLP02792 175 aaPredicted RBP12.5□□□□□ -0.41
COPS7A-221ENST00000546229 RARAP10276 462 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 LIFP15018 202 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 ALDH4A1P30038 563 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 UGT1A3P35503 534 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 ARSEP51690 589 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 STC1P52823 247 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 PTSQ03393 145 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 SRSF1Q07955 248 aaKnown RBP eCLIP12.5□□□□□ -0.41
COPS7A-221ENST00000546229 HGSNATQ68CP4 663 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 LRRC66Q68CR7 880 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 NLRP8Q86W28 1048 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 SFRP1Q8N474 314 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 AOPEPQ8N6M6 819 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 MAML1Q92585 1016 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 SCAMP4Q969E2 229 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 ZNF653Q96CK0 615 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 OR2M4Q96R27 311 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 TAAR9Q96RI9 348 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 CDH19Q9H159 772 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 SUDS3Q9H7L9 328 aaPredicted RBP12.5□□□□□ -0.41
COPS7A-221ENST00000546229 ZWILCHQ9H900 591 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.5□□□□□ -0.41
COPS7A-221ENST00000546229 OCIAD1Q9NX40 245 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 SEPT10Q9P0V9 454 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 MOSPD1Q9UJG1 213 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 CNOT6Q9ULM6 557 aaKnown RBP12.5□□□□□ -0.41
COPS7A-221ENST00000546229 OAS3Q9Y6K5 1087 aaKnown RBP12.5□□□□□ -0.41
COPS7A-221ENST00000546229 DOPEY2Q9Y3R5 2298 aa12.5□□□□□ -0.41
COPS7A-221ENST00000546229 A0A0J9YYE9 177 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 CLEC18AA5D8T8 446 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 RHPN2P1A8MT19 583 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 B4E171 279 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 H3BRJ5 948 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 DAPK3O43293 454 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 MFSD11O43934 449 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 DNAJC6O75061 913 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 RNF8O76064 485 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 TRBC1P01850 177 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 CD48P09326 243 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 CTPS1P17812 591 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 TSPAN7P41732 249 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 MMP13P45452 471 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 ASIC2Q16515 512 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 RAET1GQ6H3X3 334 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 TMCO3Q6UWJ1 677 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 CLEC18BQ6UXF7 455 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 ARHGAP22Q7Z5H3 698 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 CPNE8Q86YQ8 564 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 CLEC18CQ8NCF0 446 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 PDCD6IPQ8WUM4 868 aaKnown RBP12.49□□□□□ -0.41
COPS7A-221ENST00000546229 TEKT4Q8WW24 435 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 JPH3Q8WXH2 748 aaPredicted RBP12.49□□□□□ -0.41
COPS7A-221ENST00000546229 ART4Q93070 314 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 CD84Q9UIB8 345 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 PILRAQ9UKJ1 303 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 NENFQ9UMX5 172 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 TMEM98Q9Y2Y6 226 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 SCINQ9Y6U3 715 aa12.49□□□□□ -0.41
COPS7A-221ENST00000546229 USP9YO00507 2555 aaPredicted RBP12.49□□□□□ -0.41
COPS7A-221ENST00000546229 UTP20O75691 2785 aaKnown RBP12.48□□□□□ -0.41
COPS7A-221ENST00000546229 NBASA2RRP1 2371 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 PRR19A6NJB7 356 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 CCDC172P0C7W6 258 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 CYP2A6P11509 494 aaPredicted RBP12.48□□□□□ -0.41
COPS7A-221ENST00000546229 DESP17661 470 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 MPSTP25325 297 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 ACTR1BP42025 376 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 CDH6P55285 790 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 ACTR1AP61163 376 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 GPLD1P80108 840 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 GALNT2Q10471 571 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 ARMC12Q5T9G4 340 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 DENND2CQ68D51 928 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms