RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 MFSD7Q6UXD7 560 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 GALNT4Q8N4A0 578 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 NETO2Q8NC67 525 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 KLHDC9Q8NEP7 349 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 DQX1Q8TE96 717 aaKnown RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 ANKRD49Q8WVL7 239 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 NACC2Q96BF6 587 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 PCED1BQ96HM7 432 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 FAM111AQ96PZ2 611 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 TUBGCP5Q96RT8 1024 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 ARHGEF3Q9NR81 526 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 SAGE1Q9NXZ1 904 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 CNTN3Q9P232 1028 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 EVLQ9UI08 416 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 TMED5Q9Y3A6 229 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 PCDHA3Q9Y5H8 950 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 C9J4A7 227 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 ERCC2P18074 760 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 MMP8P22894 467 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 MGAT1P26572 445 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 HOXD11P31277 338 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 SLC5A3P53794 718 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 TAS2R50P59544 299 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 CYP4F8P98187 520 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 UBE3AQ05086 875 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 CDK18Q07002 472 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 STX4Q12846 297 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 MAD2L1Q13257 205 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 INTS6LQ5JSJ4 861 aaKnown RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 FAM20CQ8IXL6 584 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 ZFP28Q8NHY6 868 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 HEXDCQ8WVB3 486 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 SELENOMQ8WWX9 145 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 TRNAU1APQ9NX07 287 aaKnown RBP8.6□□□□□ -1.03
CLIP1-218ENST00000545889 DNAJC28Q9NX36 388 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 PCDHA11Q9Y5I1 949 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 FOCADQ5VW36 1801 aa8.6□□□□□ -1.03
CLIP1-218ENST00000545889 MSI1O43347 362 aaKnown RBP8.59□□□□□ -1.03
CLIP1-218ENST00000545889 PEX11AO75192 247 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 ZNF682O95780 498 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 ALDH4A1P30038 563 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 SKIV2L2P42285 1042 aaKnown RBP8.59□□□□□ -1.03
CLIP1-218ENST00000545889 EOGTQ5NDL2 527 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 CES3Q6UWW8 571 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 SLC26A11Q86WA9 606 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 GATAD2AQ86YP4 633 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 KLK6Q92876 244 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 PPP1R10Q96QC0 940 aaKnown RBP8.59□□□□□ -1.03
CLIP1-218ENST00000545889 THTPAQ9BU02 230 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 XYLT2Q9H1B5 865 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 TMEM245Q9H330 911 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 C10orf88Q9H8K7 445 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 AVENQ9NQS1 362 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-218ENST00000545889 NDUFA13Q9P0J0 144 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 HCN3Q9P1Z3 774 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 COG5Q9UP83 839 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 ERVK-11Q9UQG0 969 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 COLEC10Q9Y6Z7 277 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 SLC25A12O75746 678 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 RUNX1T1Q06455 604 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 ANGPT1Q15389 498 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 RFWD3Q6PCD5 774 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 LCLAT1Q6UWP7 414 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 C16orf89Q6UX73 402 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 PACS1Q6VY07 963 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 MACC1Q6ZN28 852 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 DNAJB7Q7Z6W7 309 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-218ENST00000545889 SMYD1Q8NB12 490 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 BPIFB1Q8TDL5 484 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 LRRN4Q8WUT4 740 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 WRAP53Q9BUR4 548 aaKnown RBP8.59□□□□□ -1.03
CLIP1-218ENST00000545889 PRDM12Q9H4Q4 367 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 TNPO3Q9Y5L0 923 aaKnown RBP8.59□□□□□ -1.03
CLIP1-218ENST00000545889 AK5Q9Y6K8 562 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 PTGESO14684 152 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 SCAMP1O15126 338 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 FGF18O76093 207 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 BAIAP3O94812 1187 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 CYP3A5P20815 502 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 PROZP22891 400 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 MATKP42679 507 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 NFYCQ13952 458 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 CCDC153Q494R4 210 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 XKR4Q5GH76 650 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 UBXN11Q5T124 520 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 PHF19Q5T6S3 580 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 OSTM1Q86WC4 334 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 C17orf64Q86WR6 236 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 PHF13Q86YI8 300 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-218ENST00000545889 SYT12Q8IV01 421 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 SLC7A5P1Q8MH63 180 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 RIN3Q8TB24 985 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 SPPL2AQ8TCT8 520 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 TRPC4APQ8TEL6 797 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 HEPHQ9BQS7 1158 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 CEP44Q9C0F1 390 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 BTBD1Q9H0C5 482 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 CAAP1Q9H8G2 361 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 GKN1Q9NS71 199 aa8.59□□□□□ -1.03
CLIP1-218ENST00000545889 A0A1B0GVM2 712 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms