RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 HIVEP3Q5T1R4 2406 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 FAM170AA1A519 330 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 SIGLEC16A6NMB1 481 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 POLR1CO15160 346 aaPredicted RBP14.65□□□□□ -0.06
RTN3-214ENST00000545432 SEMA7AO75326 666 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 PALMO75781 387 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 DDAH2O95865 285 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 GPD1P21695 349 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 LHCGRP22888 699 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 VIPR1P32241 457 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 ETV3P41162 512 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 MTIF2P46199 727 aaKnown RBP14.65□□□□□ -0.06
RTN3-214ENST00000545432 PMS2P54278 862 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 EPHA4P54764 986 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 BIRC2Q13490 618 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 LRP8Q14114 963 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 VWA3BQ502W6 1294 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 ADAMTSL4Q6UY14 1074 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 TICAM1Q8IUC6 712 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 ARHGAP12Q8IWW6 846 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 SLC20A1Q8WUM9 679 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 OR2M4Q96R27 311 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 MCCC1Q96RQ3 725 aaPredicted RBP14.65□□□□□ -0.06
RTN3-214ENST00000545432 TLK1Q9UKI8 766 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 POLHQ9Y253 713 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 PCDHB3Q9Y5E6 796 aa14.65□□□□□ -0.06
RTN3-214ENST00000545432 MED13Q9UHV7 2174 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 SHANK1Q9Y566 2161 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 ABCA12Q86UK0 2595 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.64□□□□□ -0.07
RTN3-214ENST00000545432 A6NCN8 305 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 ARHGAP42A6NI28 874 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 A8MX80 341 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 CREB3O43889 395 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 SOCS5O75159 536 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 RFPL1O75677 317 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 EML2O95834 649 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 C9P02748 559 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 ZNF143P52747 638 aaPredicted RBP14.64□□□□□ -0.07
RTN3-214ENST00000545432 COPB1P53618 953 aaKnown RBP14.64□□□□□ -0.07
RTN3-214ENST00000545432 IL10RBQ08334 325 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 TRIM72Q6ZMU5 477 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 KDELC2Q7Z4H8 507 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 HSD11B1LQ7Z5J1 315 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 PHLDB2Q86SQ0 1253 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 PHF13Q86YI8 300 aaPredicted RBP14.64□□□□□ -0.07
RTN3-214ENST00000545432 CREBRFQ8IUR6 639 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 C3orf20Q8ND61 904 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 SLC30A5Q8TAD4 765 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 SCRN2Q96FV2 425 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 SLC38A3Q99624 504 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 C11orf70Q9BRQ4 267 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 EPB41L1Q9H4G0 881 aa14.64□□□□□ -0.07
RTN3-214ENST00000545432 ANKRD17O75179 2603 aaKnown RBP14.63□□□□□ -0.07
RTN3-214ENST00000545432 EIF3CLB5ME19 914 aaKnown RBP14.63□□□□□ -0.07
RTN3-214ENST00000545432 CCP110O43303 1012 aa14.63□□□□□ -0.07
RTN3-214ENST00000545432 SORBS2O94875 1100 aaKnown RBP14.63□□□□□ -0.07
RTN3-214ENST00000545432 SCNN1BP51168 640 aa14.63□□□□□ -0.07
RTN3-214ENST00000545432 RENBPP51606 427 aa14.63□□□□□ -0.07
RTN3-214ENST00000545432 PPP1R15BQ5SWA1 713 aa14.63□□□□□ -0.07
RTN3-214ENST00000545432 PAPD7Q5XG87 772 aaKnown RBP14.63□□□□□ -0.07
RTN3-214ENST00000545432 IYDQ6PHW0 289 aa14.63□□□□□ -0.07
RTN3-214ENST00000545432 Q6ZVL8 140 aa14.63□□□□□ -0.07
RTN3-214ENST00000545432 LYSMD3Q7Z3D4 306 aa14.63□□□□□ -0.07
RTN3-214ENST00000545432 ZNF761Q86XN6 746 aaPredicted RBP14.63□□□□□ -0.07
RTN3-214ENST00000545432 CPT1CQ8TCG5 803 aa14.63□□□□□ -0.07
RTN3-214ENST00000545432 SH3KBP1Q96B97 665 aa14.63□□□□□ -0.07
RTN3-214ENST00000545432 AHCYL2Q96HN2 611 aaKnown RBP14.63□□□□□ -0.07
RTN3-214ENST00000545432 COX14Q96I36 57 aa14.63□□□□□ -0.07
RTN3-214ENST00000545432 PCDHB18PQ96TA0 734 aa14.63□□□□□ -0.07
RTN3-214ENST00000545432 EIF3CQ99613 913 aaKnown RBP14.63□□□□□ -0.07
RTN3-214ENST00000545432 KIAA1468Q9P260 1216 aa14.63□□□□□ -0.07
RTN3-214ENST00000545432 KCND3Q9UK17 655 aa14.63□□□□□ -0.07
RTN3-214ENST00000545432 PHTF1Q9UMS5 762 aa14.63□□□□□ -0.07
RTN3-214ENST00000545432 MN1Q10571 1320 aaPredicted RBP14.63□□□□□ -0.07
RTN3-214ENST00000545432 A8MU76 341 aa14.62□□□□□ -0.07
RTN3-214ENST00000545432 TOX3O15405 576 aaPredicted RBP14.62□□□□□ -0.07
RTN3-214ENST00000545432 DNAJC6O75061 913 aa14.62□□□□□ -0.07
RTN3-214ENST00000545432 PEX11BO96011 259 aa14.62□□□□□ -0.07
RTN3-214ENST00000545432 ZNF28P17035 718 aa14.62□□□□□ -0.07
RTN3-214ENST00000545432 HHEXQ03014 270 aa14.62□□□□□ -0.07
RTN3-214ENST00000545432 SEMA5AQ13591 1074 aa14.62□□□□□ -0.07
RTN3-214ENST00000545432 C6orf15Q6UXA7 325 aaPredicted RBP14.62□□□□□ -0.07
RTN3-214ENST00000545432 RAVER1Q8IY67 606 aaKnown RBP14.62□□□□□ -0.07
RTN3-214ENST00000545432 LZTR1Q8N653 840 aa14.62□□□□□ -0.07
RTN3-214ENST00000545432 NCSTNQ92542 709 aa14.62□□□□□ -0.07
RTN3-214ENST00000545432 CELF6Q96J87 481 aaKnown RBP14.62□□□□□ -0.07
RTN3-214ENST00000545432 ZNF599Q96NL3 588 aa14.62□□□□□ -0.07
RTN3-214ENST00000545432 TUBGCP2Q9BSJ2 902 aa14.62□□□□□ -0.07
RTN3-214ENST00000545432 CNPY3Q9BT09 278 aa14.62□□□□□ -0.07
RTN3-214ENST00000545432 CINPQ9BW66 212 aaPredicted RBP14.62□□□□□ -0.07
RTN3-214ENST00000545432 ABCG8Q9H221 673 aa14.62□□□□□ -0.07
RTN3-214ENST00000545432 SUDS3Q9H7L9 328 aaPredicted RBP14.62□□□□□ -0.07
RTN3-214ENST00000545432 UCK1Q9HA47 277 aa14.62□□□□□ -0.07
RTN3-214ENST00000545432 ADAM22Q9P0K1 906 aa14.62□□□□□ -0.07
RTN3-214ENST00000545432 CROTQ9UKG9 612 aa14.62□□□□□ -0.07
RTN3-214ENST00000545432 PCDHGA9Q9Y5G4 932 aaKnown RBP14.62□□□□□ -0.07
RTN3-214ENST00000545432 CENPEQ02224 2701 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 LILRA5A6NI73 299 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 TTLL8A6PVC2 850 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms