RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 TRIM43BA6NCK2 446 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 STX16-NPEPL1H3BU86 382 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 PFDN6O15212 129 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 RNASEH2AO75792 299 aaKnown RBP23.21■■□□□ 1.31
FOXA1-202ENST00000545425 ITGB1P05556 798 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 ZNF26P17031 533 aaPredicted RBP23.21■■□□□ 1.31
FOXA1-202ENST00000545425 PSMC3P17980 439 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 GPX3P22352 226 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 NR1H2P55055 460 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 ZNF235Q14590 738 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 MGAT5BQ3V5L5 792 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 KANK2Q63ZY3 851 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 TFAP2DQ7Z6R9 452 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 MINDY1Q8N5J2 469 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 ANKFN1Q8N957 763 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 LPGAT1Q92604 370 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 TRIM43Q96BQ3 446 aaPredicted RBP23.21■■□□□ 1.31
FOXA1-202ENST00000545425 CEP295NLQ96MC4 621 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 CCT7Q99832 543 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 AARSD1Q9BTE6 412 aaKnown RBP23.21■■□□□ 1.31
FOXA1-202ENST00000545425 NUSAP1Q9BXS6 441 aaKnown RBP23.21■■□□□ 1.31
FOXA1-202ENST00000545425 CATSPERZQ9NTU4 200 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 CCDC167Q9P0B6 97 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 GMIPQ9P107 970 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 ABCD2Q9UBJ2 740 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 PACSIN3Q9UKS6 424 aa23.21■■□□□ 1.31
FOXA1-202ENST00000545425 SYCE1LA8MT33 242 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 AZIN1O14977 448 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 NDST3O95803 873 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 SERPINF2P08697 491 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 HSD17B1P14061 328 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 ZNF37AP17032 561 aaPredicted RBP23.2■■□□□ 1.3
FOXA1-202ENST00000545425 GRIA2P42262 883 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 APOFQ13790 326 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 TRIM71Q2Q1W2 868 aaKnown RBP23.2■■□□□ 1.3
FOXA1-202ENST00000545425 ALFQ53S48 1182 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 NOMO2Q5JPE7 1267 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 PAOXQ6QHF9 649 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 SLC24A5Q71RS6 500 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 SPATA19Q7Z5L4 167 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 DHFR2Q86XF0 187 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 MIER2Q8N344 545 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 PCDH20Q8N6Y1 951 aaKnown RBP23.2■■□□□ 1.3
FOXA1-202ENST00000545425 STAG3L4Q8TBR4 150 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 KLHL5Q96PQ7 755 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 GPATCH1Q9BRR8 931 aaKnown RBP23.2■■□□□ 1.3
FOXA1-202ENST00000545425 DERL2Q9GZP9 239 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 MARCH2Q9P0N8 246 aa23.2■■□□□ 1.3
FOXA1-202ENST00000545425 EME2A4GXA9 379 aaPredicted RBP23.19■■□□□ 1.3
FOXA1-202ENST00000545425 KERAO60938 352 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 ARSDP51689 593 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 STC1P52823 247 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 MAXP61244 160 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 FAM189BP81408 668 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 EFEMP1Q12805 493 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 IL23RQ5VWK5 629 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 ZNF280DQ6N043 979 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 OGFOD2Q6N063 350 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 TXNDC11Q6PKC3 985 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 TMEM207Q6UWW9 146 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 HOMEZQ8IX15 550 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 COLGALT2Q8IYK4 626 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 TDHQ8IZJ6 230 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 OR2T34Q8NGX1 318 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 OR2T3Q8NH03 318 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 OR4L1Q8NH43 312 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 TRPC4APQ8TEL6 797 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 FBXO32Q969P5 355 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 KIAA1191Q96A73 305 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 SEMA3CQ99985 751 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 C1QTNF3Q9BXJ4 246 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 MAGEH1Q9H213 219 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 UBAP1Q9NZ09 502 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 DMTF1Q9Y222 760 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 UBFD1O14562 309 aaKnown RBP23.19■■□□□ 1.3
FOXA1-202ENST00000545425 CNTN5O94779 1100 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 GOT2P00505 430 aaKnown RBP23.19■■□□□ 1.3
FOXA1-202ENST00000545425 C7P10643 843 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 BMP2P12643 396 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 ZNF354CQ86Y25 554 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 FAM126BQ8IXS8 530 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 C2orf15Q8WU43 125 aaKnown RBP23.19■■□□□ 1.3
FOXA1-202ENST00000545425 RPRD1AQ96P16 312 aaPredicted RBP23.19■■□□□ 1.3
FOXA1-202ENST00000545425 FIS1Q9Y3D6 152 aa23.19■■□□□ 1.3
FOXA1-202ENST00000545425 ANKRD36A6QL64 1941 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 PRORSD1PA6NEY8 169 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 STX16O14662 325 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 TFAP2AP05549 437 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 CHRM1P11229 460 aaPredicted RBP23.18■■□□□ 1.3
FOXA1-202ENST00000545425 IDO1P14902 403 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 LBPP18428 481 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 INPP5AQ14642 412 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 AFTPHQ6ULP2 937 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 CHERPQ8IWX8 916 aaKnown RBP23.18■■□□□ 1.3
FOXA1-202ENST00000545425 PGBD5Q8N414 524 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 CHCHD4Q8N4Q1 142 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 RNF148Q8N7C7 305 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 PTGR2Q8N8N7 351 aaPredicted RBP23.18■■□□□ 1.3
FOXA1-202ENST00000545425 BADQ92934 168 aa23.18■■□□□ 1.3
FOXA1-202ENST00000545425 ATP6V1E2Q96A05 226 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms