RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 FOXN2P32314 431 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 PPARGP37231 505 aaPredicted RBP13.74□□□□□ -0.21
SCARB1-209ENST00000545305 P2RY2P41231 377 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 TTPAP49638 278 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 SERPINB8P50452 374 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 CLCN5P51795 746 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 RPS14P62263 151 aaKnown RBP13.74□□□□□ -0.21
SCARB1-209ENST00000545305 CNTN1Q12860 1018 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 SFSWAPQ12872 951 aaKnown RBP13.74□□□□□ -0.21
SCARB1-209ENST00000545305 TTC31Q49AM3 519 aaPredicted RBP13.74□□□□□ -0.21
SCARB1-209ENST00000545305 KIAA1211LQ6NV74 962 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 FAM151BQ6UXP7 276 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 TAS2R42Q7RTR8 314 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 EXOC3L1Q86VI1 746 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 ZC3HC1Q86WB0 502 aaKnown RBP13.74□□□□□ -0.21
SCARB1-209ENST00000545305 UBALD2Q8IYN6 164 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 GANCQ8TET4 914 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 EID2BQ96D98 161 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 ATXN7L3BQ96GX2 97 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 VPS39Q96JC1 886 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 PLEKHG4BQ96PX9 1271 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 TCF12Q99081 682 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 OMDQ99983 421 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 SELENOSQ9BQE4 189 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 CDH19Q9H159 772 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 FBXO6Q9NRD1 293 aaPredicted RBP13.74□□□□□ -0.21
SCARB1-209ENST00000545305 INTS10Q9NVR2 710 aaKnown RBP13.74□□□□□ -0.21
SCARB1-209ENST00000545305 MARCH4Q9P2E8 410 aaPredicted RBP13.74□□□□□ -0.21
SCARB1-209ENST00000545305 CORO1CQ9ULV4 474 aaPredicted RBP13.74□□□□□ -0.21
SCARB1-209ENST00000545305 MMP17Q9ULZ9 603 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 SCML1Q9UN30 329 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 ITM2BQ9Y287 266 aa13.74□□□□□ -0.21
SCARB1-209ENST00000545305 RGSL1A5PLK6 1076 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 SHISA7A6NL88 538 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 PLK4O00444 970 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 AREL1O15033 823 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 POLR3GO15318 223 aaPredicted RBP13.73□□□□□ -0.21
SCARB1-209ENST00000545305 NDUFS3O75489 264 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 SRP72O76094 671 aaKnown RBP13.73□□□□□ -0.21
SCARB1-209ENST00000545305 AHSGP02765 367 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 BRAFP15056 766 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 COL9A1P20849 921 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 ABCG1P45844 678 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 LEPRP48357 1165 aaKnown RBP13.73□□□□□ -0.21
SCARB1-209ENST00000545305 POLD2P49005 469 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 SPINT3P49223 89 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 COPAP53621 1224 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 SLC12A2P55011 1212 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 DCDC1P59894 354 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 PPP2R2AP63151 447 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 XIAPP98170 497 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 PTSQ03393 145 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 RALGDSQ12967 914 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 PEX6Q13608 980 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 ACOX1Q15067 660 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 TYSND1Q2T9J0 566 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 GPR33Q49SQ1 333 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 TMEM52BQ4KMG9 183 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 LYPLAL1Q5VWZ2 237 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 CERS6Q6ZMG9 384 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 TIFABQ6ZNK6 161 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 HSD11B1LQ7Z5J1 315 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 SNX20Q7Z614 316 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 RAVER1Q8IY67 606 aaKnown RBP13.73□□□□□ -0.21
SCARB1-209ENST00000545305 SYNPOQ8N3V7 929 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 HDDC3Q8N4P3 179 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 CXorf40AQ8TE69 158 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 MZB1Q8WU39 189 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 ALKBH8Q96BT7 664 aaKnown RBP13.73□□□□□ -0.21
SCARB1-209ENST00000545305 ELMO2Q96JJ3 720 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 GPR22Q99680 433 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 WRAP53Q9BUR4 548 aaKnown RBP13.73□□□□□ -0.21
SCARB1-209ENST00000545305 IL26Q9NPH9 171 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 CRLS1Q9UJA2 301 aa13.73□□□□□ -0.21
SCARB1-209ENST00000545305 FAM95CA0A1B0GW59 222 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 A0A1W2PP55 124 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 A0A1W2PPM1 405 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 A0A1W2PQF6 199 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 AP1G1O43747 822 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 RNASEH2AO75792 299 aaKnown RBP13.72□□□□□ -0.21
SCARB1-209ENST00000545305 S1PR4O95977 384 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 F7P08709 466 aaPredicted RBP13.72□□□□□ -0.21
SCARB1-209ENST00000545305 ACADMP11310 421 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 KRT4P19013 534 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 LIG3P49916 1009 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 ZBTB16Q05516 673 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 NFATC2Q13469 925 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 ITGA9Q13797 1035 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 UBXN2BQ14CS0 331 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 ZNF284Q2VY69 593 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 PIP5KL1Q5T9C9 394 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.72□□□□□ -0.21
SCARB1-209ENST00000545305 LIPIQ6XZB0 460 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 MICALCLQ6ZW33 695 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 LDB1Q86U70 411 aaPredicted RBP13.72□□□□□ -0.21
SCARB1-209ENST00000545305 TMPRSS6Q8IU80 811 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 NRSN1Q8IZ57 195 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 C4orf33Q8N1A6 199 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 DCLK2Q8N568 766 aa13.72□□□□□ -0.21
SCARB1-209ENST00000545305 AADATQ8N5Z0 425 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms