RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 NCF1BA6NI72 391 aaPredicted RBP13.64□□□□□ -0.23
HCFC2-202ENST00000544223 NCF1CA8MVU1 366 aaPredicted RBP13.64□□□□□ -0.23
HCFC2-202ENST00000544223 NEMP1O14524 444 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 SRP72O76094 671 aaKnown RBP13.64□□□□□ -0.23
HCFC2-202ENST00000544223 RB1P06400 928 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 HLA-EP13747 358 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 NCF1P14598 390 aaPredicted RBP13.64□□□□□ -0.23
HCFC2-202ENST00000544223 TFEBP19484 476 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 MYLK3Q32MK0 819 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 KIAA0408Q6ZU52 694 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 CLNKQ7Z7G1 428 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 CACUL1Q86Y37 369 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 TSNARE1Q96NA8 513 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 BIRC8Q96P09 236 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 IL17CQ9P0M4 197 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 MBD1Q9UIS9 605 aaPredicted RBP13.64□□□□□ -0.23
HCFC2-202ENST00000544223 TRIOBPQ9H2D6 2365 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 H0YHG0 523 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 PLK4O00444 970 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 PPP6CO00743 305 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 GAPDHSO14556 408 aaPredicted RBP13.64□□□□□ -0.23
HCFC2-202ENST00000544223 TRIM13O60858 407 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 NDUFS3O75489 264 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 HSPA4LO95757 839 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 IGSF6O95976 241 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 HNRNPA1P09651 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
HCFC2-202ENST00000544223 LHCGRP22888 699 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 CLCN5P51795 746 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 XIAPP98170 497 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 KDSRQ06136 332 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 BNIP1Q12981 228 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 GRM2Q14416 872 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 OR4D1Q15615 310 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 ARL13AQ5H913 290 aaPredicted RBP13.64□□□□□ -0.23
HCFC2-202ENST00000544223 PPP4R1Q8TF05 950 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 LPGAT1Q92604 370 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 GPR21Q99679 349 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 POMKQ9H5K3 350 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 ZFYVE1Q9HBF4 777 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 ARL8BQ9NVJ2 186 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 GTSE1Q9NYZ3 720 aa13.64□□□□□ -0.23
HCFC2-202ENST00000544223 A0A0J9YYE9 177 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 A8MUI8 341 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 RHOBTB1O94844 696 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 SIX3O95343 332 aaPredicted RBP13.63□□□□□ -0.23
HCFC2-202ENST00000544223 PRAMEF1O95521 474 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 TRBC1P01850 177 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 CRABP2P29373 138 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 LACTB2Q53H82 288 aaPredicted RBP13.63□□□□□ -0.23
HCFC2-202ENST00000544223 CTSL3PQ5NE16 218 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 ZYG11AQ6WRX3 759 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 OR2A12Q8NGT7 310 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 FBXO27Q8NI29 283 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 PIWIL2Q8TC59 973 aaKnown RBP13.63□□□□□ -0.23
HCFC2-202ENST00000544223 ESAMQ96AP7 390 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 KLHL32Q96NJ5 620 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 WDR55Q9H6Y2 383 aaPredicted RBP13.63□□□□□ -0.23
HCFC2-202ENST00000544223 ATP13A3Q9H7F0 1226 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 IL26Q9NPH9 171 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 ZDHHC2Q9UIJ5 367 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 KIF26AQ9ULI4 1882 aaPredicted RBP13.63□□□□□ -0.23
HCFC2-202ENST00000544223 TCF20Q9UGU0 1960 aaKnown RBP13.63□□□□□ -0.23
HCFC2-202ENST00000544223 PRRT4C9JH25 899 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 DIAPH2O60879 1101 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 CTSLP07711 333 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 GSTA1P08263 222 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 BPIP17213 487 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 AP1S1P61966 158 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 DLX2Q07687 328 aaPredicted RBP13.63□□□□□ -0.23
HCFC2-202ENST00000544223 SETDB1Q15047 1291 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 CTC1Q2NKJ3 1217 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 LRRC66Q68CR7 880 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 TANGO2Q6ICL3 276 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 SDCCAG8Q86SQ7 713 aaPredicted RBP13.63□□□□□ -0.23
HCFC2-202ENST00000544223 TREML1Q86YW5 311 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 LSMEM2Q8N112 164 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 GIMAP7Q8NHV1 300 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 UBXN10Q96LJ8 280 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 ZDHHC7Q9NXF8 308 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 HS3ST2Q9Y278 367 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 STK38LQ9Y2H1 464 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 PKP3Q9Y446 797 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 PRSS21Q9Y6M0 314 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 F5P12259 2224 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 DOCK8Q8NF50 2099 aa13.63□□□□□ -0.23
HCFC2-202ENST00000544223 UBXN8O00124 270 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 FCHO1O14526 889 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 HTRA2O43464 458 aaPredicted RBP13.62□□□□□ -0.23
HCFC2-202ENST00000544223 MTX2O75431 263 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 CHRM1P11229 460 aaPredicted RBP13.62□□□□□ -0.23
HCFC2-202ENST00000544223 FDXRP22570 491 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 HOXA9P31269 272 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 PDAP1Q13442 181 aaKnown RBP13.62□□□□□ -0.23
HCFC2-202ENST00000544223 CDKN3Q16667 212 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 DUSP6Q16828 381 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 SLC9B1Q4ZJI4 515 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 ARSIQ5FYB1 569 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 TECRLQ5HYJ1 363 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 AFTPHQ6ULP2 937 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 CRTC1Q6UUV9 634 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms