RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 AQP12AQ8IXF9 295 aa16.57■□□□□ 0.24
KDM2B-216ENST00000543025 PTGR2Q8N8N7 351 aaPredicted RBP16.57■□□□□ 0.24
KDM2B-216ENST00000543025 TWIST2Q8WVJ9 160 aa16.57■□□□□ 0.24
KDM2B-216ENST00000543025 ZNF512Q96ME7 567 aaPredicted RBP16.57■□□□□ 0.24
KDM2B-216ENST00000543025 DEFB118Q96PH6 123 aa16.57■□□□□ 0.24
KDM2B-216ENST00000543025 ZYG11BQ9C0D3 744 aa16.57■□□□□ 0.24
KDM2B-216ENST00000543025 AGO3Q9H9G7 860 aaKnown RBP16.57■□□□□ 0.24
KDM2B-216ENST00000543025 CLK4Q9HAZ1 481 aaKnown RBP16.57■□□□□ 0.24
KDM2B-216ENST00000543025 POLR3BQ9NW08 1133 aaPredicted RBP16.57■□□□□ 0.24
KDM2B-216ENST00000543025 MAP10Q9P2G4 905 aa16.57■□□□□ 0.24
KDM2B-216ENST00000543025 UXTQ9UBK9 157 aaPredicted RBP16.57■□□□□ 0.24
KDM2B-216ENST00000543025 NLRC5Q86WI3 1866 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 ANGPT2O15123 496 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 HNRNPRO43390 633 aaKnown RBP16.56■□□□□ 0.24
KDM2B-216ENST00000543025 CDK14O94921 469 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 SLC4A1P02730 911 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 HAPLN1P10915 354 aaPredicted RBP16.56■□□□□ 0.24
KDM2B-216ENST00000543025 RHOQP17081 205 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 MIER2Q8N344 545 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 RYBPQ8N488 228 aaPredicted RBP16.56■□□□□ 0.24
KDM2B-216ENST00000543025 MINDY1Q8N5J2 469 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 PACRGLQ8N7B6 248 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 SH3RF2Q8TEC5 729 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 TFAP2CQ92754 450 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 LRCH3Q96II8 777 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 MID1IP1Q9NPA3 183 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 GMPR2Q9P2T1 348 aaKnown RBP16.56■□□□□ 0.24
KDM2B-216ENST00000543025 SLC8A2Q9UPR5 921 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 TLR6Q9Y2C9 796 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 TANC1Q9C0D5 1861 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 GPR182O15218 404 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 LDB2O43679 373 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 HOXB8P17481 243 aaPredicted RBP16.56■□□□□ 0.24
KDM2B-216ENST00000543025 CDK9P50750 372 aaKnown RBP16.56■□□□□ 0.24
KDM2B-216ENST00000543025 ACLYP53396 1101 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 NME5P56597 212 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 HPCAP84074 193 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 BNIP2Q12982 314 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 IHHQ14623 411 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 INPP5AQ14642 412 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 TBCELQ5QJ74 424 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 INTS11Q5TA45 600 aaKnown RBP16.56■□□□□ 0.24
KDM2B-216ENST00000543025 ZNF354CQ86Y25 554 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 FAM47BQ8NA70 645 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.56■□□□□ 0.243e-11■■■■■ 36.6
KDM2B-216ENST00000543025 IL1RL2Q9HB29 575 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 PRDM5Q9NQX1 630 aaPredicted RBP16.56■□□□□ 0.24
KDM2B-216ENST00000543025 TMEM248Q9NWD8 314 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 AURKCQ9UQB9 309 aa16.56■□□□□ 0.24
KDM2B-216ENST00000543025 DNAH12Q6ZR08 3092 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 DHRS12A0PJE2 317 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 AZIN1O14977 448 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 PIP5K1BO14986 540 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 GLP2RO95838 553 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 CHRNA1P02708 482 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 CDK4P11802 303 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 HSD17B1P14061 328 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 VPS26BQ4G0F5 336 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 CAMK1DQ8IU85 385 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 FIBCD1Q8N539 461 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 TEX26Q8N6G2 289 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 PSMG2Q969U7 264 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 TBATAQ96M53 351 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 LOC285095A0A1B0GVY8 99 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 SIX3O95343 332 aaPredicted RBP16.55■□□□□ 0.24
KDM2B-216ENST00000543025 ATXN1LP0C7T5 689 aaKnown RBP16.55■□□□□ 0.24
KDM2B-216ENST00000543025 ZNF37AP17032 561 aaPredicted RBP16.55■□□□□ 0.24
KDM2B-216ENST00000543025 CAPN3P20807 821 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 PAX3P23760 479 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 PSMA4P25789 261 aaKnown RBP16.55■□□□□ 0.24
KDM2B-216ENST00000543025 KANK2Q63ZY3 851 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 LPCAT2Q7L5N7 544 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 PHYKPLQ8IUZ5 450 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 ERI1Q8IV48 349 aaKnown RBP16.55■□□□□ 0.24
KDM2B-216ENST00000543025 SLC15A3Q8IY34 581 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 ZNF683Q8IZ20 524 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 MFSD2AQ8NA29 543 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 GOLM1Q8NBJ4 401 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 RHEBL1Q8TAI7 183 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 FAM110BQ8TC76 370 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 GRIN3AQ8TCU5 1115 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 TRPC4APQ8TEL6 797 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 TMIGD2Q96BF3 282 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 TADA1Q96BN2 335 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 ARMC5Q96C12 935 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 SLC39A13Q96H72 371 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 GID8Q9NWU2 228 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 KCTD3Q9Y597 815 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 PTGDR2Q9Y5Y4 395 aa16.55■□□□□ 0.24
KDM2B-216ENST00000543025 TTC24A2A3L6 582 aaPredicted RBP16.54■□□□□ 0.24
KDM2B-216ENST00000543025 MOXD2PA6NHM9 499 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 PLOD2O00469 737 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 PPP6CO00743 305 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 MATN4O95460 622 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 IL10P22301 178 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 FOXA1P55317 472 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 ACVR1Q04771 509 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 TUSC3Q13454 348 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 PFKFB4Q16877 469 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 ALFQ53S48 1182 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms