RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 WDR77Q9BQA1 342 aaPredicted RBP9.4□□□□□ -0.9
YBX3-211ENST00000541351 TKTL2Q9H0I9 626 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 WASH6PQ9NQA3 447 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 OLAHQ9NV23 265 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 STAP1Q9ULZ2 295 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 TRAF3IP3Q9Y228 551 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 PCDHB4Q9Y5E5 795 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 CLIC4Q9Y696 253 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 TRGV8A0A0C4DH27 118 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 KIR2DS5A0A0G2JLQ3 304 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 A0A0G2JNG1 304 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 LILRA5A6NI73 299 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 FAM171A2A8MVW0 826 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 PPP1R3GB7ZBB8 358 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 KIR2DS3K7RE56 304 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 MASP2O00187 686 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 CCL21O00585 134 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 JRKO75564 520 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 CEACAM5P06731 702 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 AMD1P17707 334 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 GGCXP38435 758 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 SEPHS1P49903 392 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 KRTAP10-9P60411 292 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 RHOAP61586 193 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 OTUD4Q01804 1114 aaKnown RBP9.39□□□□□ -0.91
YBX3-211ENST00000541351 ACY1Q03154 408 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 CDC16Q13042 620 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 NFATC2Q13469 925 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 RAPSNQ13702 412 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 KIR2DS5Q14953 304 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 LLGL1Q15334 1064 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 SKOR2Q2VWA4 1001 aaPredicted RBP9.39□□□□□ -0.91
YBX3-211ENST00000541351 NYAP1Q6ZVC0 841 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 TMEM110Q86TL2 294 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 CUZD1Q86UP6 607 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 DNAAF5Q86Y56 855 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 DEFB106AQ8N104 65 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 CBARPQ8N350 705 aaPredicted RBP9.39□□□□□ -0.91
YBX3-211ENST00000541351 ADAMTS17Q8TE56 1095 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 PPP4R1Q8TF05 950 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 TFAP2BQ92481 460 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 SEMA4DQ92854 862 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 NINJ1Q92982 152 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 MTFMTQ96DP5 389 aaKnown RBP9.39□□□□□ -0.91
YBX3-211ENST00000541351 ZDHHC12Q96GR4 267 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 SLC2A13Q96QE2 648 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 MDFIQ99750 246 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 LGR4Q9BXB1 951 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 MAGEH1Q9H213 219 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 KCTD10Q9H3F6 313 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 SUV39H2Q9H5I1 410 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 CBX8Q9HC52 389 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 FGF21Q9NSA1 209 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 MPP6Q9NZW5 540 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 SERTAD1Q9UHV2 236 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 NTNG1Q9Y2I2 539 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 PADI2Q9Y2J8 665 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 PLEKHM1Q9Y4G2 1056 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 PCDHGB6Q9Y5F9 930 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 FER1L5A0AVI2 2057 aa9.39□□□□□ -0.91
YBX3-211ENST00000541351 TSPAN11A1L157 253 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 E5RJQ4 531 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 PEX12O00623 359 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 BUB1BO60566 1050 aaPredicted RBP9.38□□□□□ -0.91
YBX3-211ENST00000541351 SRGAP2O75044 1071 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 EPB41P11171 864 aaKnown RBP9.38□□□□□ -0.91
YBX3-211ENST00000541351 ITIH2P19823 946 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 BRD2P25440 801 aaKnown RBP9.38□□□□□ -0.91
YBX3-211ENST00000541351 PBX1P40424 430 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 GPD2P43304 727 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 MAPKAPK2P49137 400 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 FOLH1Q04609 750 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 TUBB3Q13509 450 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 ACOX1Q15067 660 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 E2F4Q16254 413 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 INO80DQ53TQ3 878 aaPredicted RBP9.38□□□□□ -0.91
YBX3-211ENST00000541351 ATXN7L2Q5T6C5 722 aaPredicted RBP9.38□□□□□ -0.91
YBX3-211ENST00000541351 IRAK1BP1Q5VVH5 260 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 ZNF517Q6ZMY9 492 aaPredicted RBP9.38□□□□□ -0.91
YBX3-211ENST00000541351 PRSS42Q7Z5A4 293 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 ZNF354CQ86Y25 554 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 GALNT13Q8IUC8 556 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 DRC7Q8IY82 874 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 GALNT16Q8N428 558 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 ANKRD20A12PQ8NF67 263 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 OR8K5Q8NH50 307 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 CCDC47Q96A33 483 aaKnown RBP9.38□□□□□ -0.91
YBX3-211ENST00000541351 NUS1Q96E22 293 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 TUBGCP5Q96RT8 1024 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 SLX1AQ9BQ83 275 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 TEX101Q9BY14 249 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 NLNQ9BYT8 704 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 FRMD8Q9BZ67 464 aaPredicted RBP9.38□□□□□ -0.91
YBX3-211ENST00000541351 CXXC4Q9H2H0 198 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 UCK1Q9HA47 277 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 TCFL5Q9UL49 500 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 SMC3Q9UQE7 1217 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 SLC17A4Q9Y2C5 497 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 DCHS2Q6V1P9 2916 aa9.38□□□□□ -0.91
YBX3-211ENST00000541351 MYO7BQ6PIF6 2116 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms