RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 MT-ND1P03886 318 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 ZNF23P17027 643 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 CYP2A7P20853 494 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 ECHS1P30084 290 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 GDI1P31150 447 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 MFSD5Q6N075 450 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 RRM2BQ7LG56 351 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 RTN4RL1Q86UN2 441 aaPredicted RBP9.53□□□□□ -0.88
TTC39C-203ENST00000540918 CFAP206Q8IYR0 622 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 C8orf48Q96LL4 319 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 BTBD10Q9BSF8 475 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 LINC00597Q9H2U6 94 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 PCDH12Q9NPG4 1184 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 TLR9Q9NR96 1032 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 GID8Q9NWU2 228 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 TRPC4Q9UBN4 977 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 APPL1Q9UKG1 709 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 TEX264Q9Y6I9 313 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 HDAC3O15379 428 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 LUC7L3O95232 432 aaKnown RBP9.53□□□□□ -0.88
TTC39C-203ENST00000540918 ADH1CP00326 375 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 KRT6AP02538 564 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 KRT6BP04259 564 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 PCCBP05166 539 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 GSNP06396 782 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 ANXA5P08758 320 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 TYRP14679 529 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 ATP6V1B2P21281 511 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 GDF5P43026 501 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 KRT6CP48668 564 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 POU5F1Q01860 360 aaKnown RBP9.53□□□□□ -0.88
TTC39C-203ENST00000540918 PTPRRQ15256 657 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 TIGD2Q4W5G0 525 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 CDHR3Q6ZTQ4 885 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 CHST15Q7LFX5 561 aaPredicted RBP9.53□□□□□ -0.88
TTC39C-203ENST00000540918 ZNF572Q7Z3I7 529 aaPredicted RBP9.53□□□□□ -0.88
TTC39C-203ENST00000540918 CUZD1Q86UP6 607 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 PLD6Q8N2A8 252 aaKnown RBP9.53□□□□□ -0.88
TTC39C-203ENST00000540918 SCAMP4Q969E2 229 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 CLIP3Q96DZ5 547 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 MRPL57Q9BQC6 102 aaKnown RBP9.53□□□□□ -0.88
TTC39C-203ENST00000540918 KLHL3Q9UH77 587 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 PADI4Q9UM07 663 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 CNTN6Q9UQ52 1028 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 NDUFAF1Q9Y375 327 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 STARD13Q9Y3M8 1113 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 GPR39O43194 453 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 CYP7B1O75881 506 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 MLNP12872 115 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 CCDC15Q0P6D6 951 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 PITRM1Q5JRX3 1037 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 LIPMQ5VYY2 423 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 GK5Q6ZS86 529 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 PIWIL4Q7Z3Z4 852 aaKnown RBP9.53□□□□□ -0.88
TTC39C-203ENST00000540918 DSG4Q86SJ6 1040 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 DCAKDQ8WVC6 231 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 FCRL3Q96P31 734 aaPredicted RBP9.53□□□□□ -0.88
TTC39C-203ENST00000540918 RERGLQ9H628 205 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 MIEF1Q9NQG6 463 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 IGSF9Q9P2J2 1179 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 GIMAP2Q9UG22 337 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 ECM29Q5VYK3 1845 aa9.53□□□□□ -0.88
TTC39C-203ENST00000540918 ZNF840PA6NDX5 716 aa9.52□□□□□ -0.88
TTC39C-203ENST00000540918 RFXAPO00287 272 aa9.52□□□□□ -0.88
TTC39C-203ENST00000540918 EFCAB14O75071 495 aa9.52□□□□□ -0.88
TTC39C-203ENST00000540918 PABPC1P11940 636 aaKnown RBP9.52□□□□□ -0.88
TTC39C-203ENST00000540918 MYOGP15173 224 aa9.52□□□□□ -0.88
TTC39C-203ENST00000540918 POU1F1P28069 291 aa9.52□□□□□ -0.88
TTC39C-203ENST00000540918 CDK7P50613 346 aa9.52□□□□□ -0.88
TTC39C-203ENST00000540918 NDST2P52849 883 aa9.52□□□□□ -0.88
TTC39C-203ENST00000540918 CAP1Q01518 475 aa9.52□□□□□ -0.88
TTC39C-203ENST00000540918 ZBTB6Q15916 424 aa9.52□□□□□ -0.88
TTC39C-203ENST00000540918 SPDYCQ5MJ68 293 aa9.52□□□□□ -0.88
TTC39C-203ENST00000540918 BANPQ8N9N5 519 aa9.52□□□□□ -0.88
TTC39C-203ENST00000540918 RELTQ969Z4 430 aa9.52□□□□□ -0.88
TTC39C-203ENST00000540918 CDKN2AIPNLQ96HQ2 116 aa9.52□□□□□ -0.88
TTC39C-203ENST00000540918 FAM83DQ9H4H8 585 aa9.52□□□□□ -0.88
TTC39C-203ENST00000540918 TRAF6Q9Y4K3 522 aa9.52□□□□□ -0.88
TTC39C-203ENST00000540918 A0A087X1B8 175 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 TGM5O43548 720 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 ULK1O75385 1050 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 KRT36O76013 467 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 CATP04040 527 aaKnown RBP9.52□□□□□ -0.89
TTC39C-203ENST00000540918 PGFP49763 221 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 ACSM2AQ08AH3 577 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 RALGDSQ12967 914 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 INPP5AQ14642 412 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 NRF1Q16656 503 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 XKR6Q5GH73 641 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 ACSM2BQ68CK6 577 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 MBLAC2Q68D91 279 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 SMYD5Q6GMV2 418 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 UBE2R2Q712K3 238 aaPredicted RBP9.52□□□□□ -0.89
TTC39C-203ENST00000540918 TMPRSS6Q8IU80 811 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 NKAPQ8N5F7 415 aaKnown RBP9.52□□□□□ -0.89
TTC39C-203ENST00000540918 DEFB119Q8N690 84 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 KLHDC9Q8NEP7 349 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 VPS37AQ8NEZ2 397 aa9.52□□□□□ -0.89
TTC39C-203ENST00000540918 PNPT1Q8TCS8 783 aaKnown RBP9.52□□□□□ -0.89
TTC39C-203ENST00000540918 FCRL5Q96RD9 977 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms