RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 CCNJLQ8IV13 435 aa13.07□□□□□ -0.32
SEMA4D-223ENST00000540475 SFTPA2Q8IWL1 248 aa13.07□□□□□ -0.32
SEMA4D-223ENST00000540475 PLD5Q8N7P1 536 aa13.07□□□□□ -0.32
SEMA4D-223ENST00000540475 TMEM159Q96B96 161 aa13.07□□□□□ -0.32
SEMA4D-223ENST00000540475 CCDC97Q96F63 343 aaPredicted RBP13.07□□□□□ -0.32
SEMA4D-223ENST00000540475 TMEM74Q96NL1 305 aa13.07□□□□□ -0.32
SEMA4D-223ENST00000540475 FCRL3Q96P31 734 aaPredicted RBP13.07□□□□□ -0.32
SEMA4D-223ENST00000540475 GFM1Q96RP9 751 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-223ENST00000540475 GSDMCQ9BYG8 508 aa13.07□□□□□ -0.32
SEMA4D-223ENST00000540475 CARS2Q9HA77 564 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-223ENST00000540475 LRIT1Q9P2V4 623 aa13.07□□□□□ -0.32
SEMA4D-223ENST00000540475 SUFUQ9UMX1 484 aa13.07□□□□□ -0.32
SEMA4D-223ENST00000540475 PCDHGA7Q9Y5G6 932 aa13.07□□□□□ -0.32
SEMA4D-223ENST00000540475 RNF215Q9Y6U7 377 aa13.07□□□□□ -0.32
SEMA4D-223ENST00000540475 PMS2P1A4D2B8 440 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 RGSL1A5PLK6 1076 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 CAPN8A6NHC0 703 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 ANKRD66B4E2M5 251 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 INHBCP55103 352 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 ITKQ08881 620 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 TBX2Q13207 712 aaPredicted RBP13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 SQSTM1Q13501 440 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 PEX6Q13608 980 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 TCEA2Q15560 299 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 TAZQ16635 292 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 SLITRK4Q8IW52 837 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 RHOT2Q8IXI1 618 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 CCDC13Q8IYE1 715 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 CNTD1Q8N815 330 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 KIAA1524Q8TCG1 905 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 PTCD2Q8WV60 388 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 KCNE4Q8WWG9 221 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 TADA1Q96BN2 335 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 AP2M1Q96CW1 435 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 WBP1Q96G27 269 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 OLFM3Q96PB7 478 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 SMIM14Q96QK8 99 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 WDR24Q96S15 920 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 B3GNT4Q9C0J1 378 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 DPEP2Q9H4A9 486 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 NHEJ1Q9H9Q4 299 aaPredicted RBP13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 PCDH9Q9HC56 1237 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 ZNHIT6Q9NWK9 470 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 TAAR2Q9P1P5 351 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 INTUQ9ULD6 942 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 CHKBQ9Y259 395 aa13.06□□□□□ -0.32
SEMA4D-223ENST00000540475 GCN1Q92616 2671 aaKnown RBP13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 A0A0U1RQS6 177 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 PLD2O14939 933 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 B4GAT1O43505 415 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 AKR1B10O60218 316 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 MFAP3LO75121 409 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 TNFSF15O95150 251 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 MAP3K6O95382 1288 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 CA4P22748 312 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 UGT1A5P35504 534 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 ADCY8P40145 1251 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 GPR3P46089 330 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 GPR1P46091 355 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 POLD2P49005 469 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 TMPRSS3P57727 454 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 CTBSQ01459 385 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 ILF3Q12906 894 aaKnown RBP eCLIP13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 MESDQ14696 234 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 PYCR3Q53H96 274 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 BROXQ5VW32 411 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 DENND2CQ68D51 928 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 RAET1GQ6H3X3 334 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 PCSK4Q6UW60 755 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 RAB11FIP2Q7L804 512 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 FBXO39Q8N4B4 442 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 EXD1Q8NHP7 514 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 ZDHHC1Q8WTX9 485 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 SCAMP4Q969E2 229 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 AGAP2Q99490 1192 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 STRADBQ9C0K7 418 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 DEF6Q9H4E7 631 aa13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 CNOT6Q9ULM6 557 aaKnown RBP13.05□□□□□ -0.32
SEMA4D-223ENST00000540475 B4DGG1 531 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 NVLO15381 856 aaKnown RBP13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 KLK10O43240 276 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 JCHAINP01591 159 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 AK4P27144 223 aaPredicted RBP13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 SLC1A1P43005 524 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 GNPDA1P46926 289 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 SPINT3P49223 89 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 HADHBP55084 474 aaKnown RBP13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 CLN3Q13286 438 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 SLC14A2Q15849 920 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 QPCTQ16769 361 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 HENMT1Q5T8I9 393 aaKnown RBP13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 TMPRSS9Q7Z410 1059 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 NAGSQ8N159 534 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 CCDC42Q96M95 316 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 TRIB3Q96RU7 358 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 FOXP3Q9BZS1 431 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 BRD8Q9H0E9 1235 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 VPS18Q9P253 973 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 CD84Q9UIB8 345 aa13.04□□□□□ -0.32
SEMA4D-223ENST00000540475 MOSPD1Q9UJG1 213 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms