RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 IL27RAQ6UWB1 636 aa12.67□□□□□ -0.38
TSPAN9-207ENST00000539631 NLRP8Q86W28 1048 aa12.67□□□□□ -0.38
TSPAN9-207ENST00000539631 DCP2Q8IU60 420 aaKnown RBP12.67□□□□□ -0.38
TSPAN9-207ENST00000539631 MINDY1Q8N5J2 469 aa12.67□□□□□ -0.38
TSPAN9-207ENST00000539631 DNAAF3Q8N9W5 541 aa12.67□□□□□ -0.38
TSPAN9-207ENST00000539631 GPR26Q8NDV2 337 aa12.67□□□□□ -0.38
TSPAN9-207ENST00000539631 BRSK1Q8TDC3 778 aa12.67□□□□□ -0.38
TSPAN9-207ENST00000539631 FUBP1Q96AE4 644 aaKnown RBP12.67□□□□□ -0.38
TSPAN9-207ENST00000539631 FAM83DQ9H4H8 585 aa12.67□□□□□ -0.38
TSPAN9-207ENST00000539631 GAREM1Q9H706 876 aa12.67□□□□□ -0.38
TSPAN9-207ENST00000539631 CAAP1Q9H8G2 361 aa12.67□□□□□ -0.38
TSPAN9-207ENST00000539631 GDF3Q9NR23 364 aa12.67□□□□□ -0.38
TSPAN9-207ENST00000539631 IL17CQ9P0M4 197 aa12.67□□□□□ -0.38
TSPAN9-207ENST00000539631 KCTD3Q9Y597 815 aa12.67□□□□□ -0.38
TSPAN9-207ENST00000539631 TDRD6O60522 2096 aaKnown RBP12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 TOR1BO14657 336 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 TTI1O43156 1089 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 CRTAMO95727 393 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 LPOP22079 712 aaPredicted RBP12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 TRIM23P36406 574 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 MAGEA6P43360 314 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 THOP1P52888 689 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 MRPS25P82663 173 aaKnown RBP12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 FZD2Q14332 565 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 POU6F1Q14863 301 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 NFATC4Q14934 902 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 CERCAMQ5T4B2 595 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 HENMT1Q5T8I9 393 aaKnown RBP12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 ANKRD22Q5VYY1 191 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 ZNF572Q7Z3I7 529 aaPredicted RBP12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 HEATR4Q86WZ0 1026 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 JAMLQ86YT9 394 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 KIF18AQ8NI77 898 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 CPT1BQ92523 772 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 ELF4Q99607 663 aaPredicted RBP12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 TRIM51Q9BSJ1 452 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 LGR4Q9BXB1 951 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 ERVMER34-1Q9H9K5 563 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 TMEM9BQ9NQ34 198 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 RAD18Q9NS91 495 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 ASIC3Q9UHC3 531 aa12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 FNDC3AQ9Y2H6 1198 aaKnown RBP12.66□□□□□ -0.38
TSPAN9-207ENST00000539631 OTOGLQ3ZCN5 2332 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 SPTY2D1-AS1A0A0U1RR47 76 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 C2orf81A6NN90 581 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 C4orf47A7E2U8 309 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 FADS2P1A8MWK0 482 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 DNALI1O14645 258 aaPredicted RBP12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 STX7O15400 261 aaKnown RBP12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 LDB2O43679 373 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 TMEM63AO94886 807 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 CER1O95813 267 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 TEAD1P28347 426 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 ADCY8P40145 1251 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 KIAA1024LP59773 190 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 DCDC1P59894 354 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 TMPRSS15P98073 1019 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 IL9RQ01113 521 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 CKAP4Q07065 602 aaKnown RBP12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 EIF2B5Q13144 721 aaKnown RBP12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 SEPT6Q14141 434 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 DHX34Q14147 1143 aaKnown RBP12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 PTK2BQ14289 1009 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 SHBQ15464 509 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 WHAMMP3Q1A5X7 153 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 ZNF542PQ5EBM4 170 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 STPG1Q5TH74 334 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 ENPP7Q6UWV6 458 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 MACC1Q6ZN28 852 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 SYDE1Q6ZW31 735 aaPredicted RBP12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 ZNF534Q76KX8 674 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 OR4K2Q8NGD2 314 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 OR13C4Q8NGS5 318 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 SPATA16Q9BXB7 569 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 TEX101Q9BY14 249 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 WDR26Q9H7D7 661 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 NFKBIL1Q9UBC1 381 aaPredicted RBP12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 PNMA8BQ9ULN7 279 aaPredicted RBP12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 PKP3Q9Y446 797 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 MRFAP1Q9Y605 127 aa12.65□□□□□ -0.38
TSPAN9-207ENST00000539631 BPTFQ12830 3046 aa12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 A0A1B0GTQ1 180 aa12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 CCDC78A2IDD5 438 aa12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 TMEM202A6NGA9 273 aa12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 CACNB4O00305 520 aaPredicted RBP12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 INPP4BO15327 924 aa12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 HOXC4P09017 264 aaPredicted RBP12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 MYCLP1P12525 358 aaPredicted RBP12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 IVDP26440 423 aa12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 SPAM1P38567 509 aa12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 ZNF140P52738 457 aaPredicted RBP12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 SESN2P58004 480 aaPredicted RBP12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 CDK3Q00526 305 aa12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 CDK16Q00536 496 aa12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 BNIP3Q12983 259 aa12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 UAP1L1Q3KQV9 507 aa12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 CCDC38Q502W7 563 aa12.64□□□□□ -0.39
TSPAN9-207ENST00000539631 RNASEH2BQ5TBB1 312 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms