RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 FOXN2P32314 431 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 HADHAP40939 763 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 POLD2P49005 469 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 ZNF140P52738 457 aaPredicted RBP8.85□□□□□ -0.99
DDB1-213ENST00000539332 TRAF2Q12933 501 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 SEPT6Q14141 434 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 DMC1Q14565 340 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 SMAD2Q15796 467 aaKnown RBP8.85□□□□□ -0.99
DDB1-213ENST00000539332 UGP2Q16851 508 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 LEXMQ3ZCV2 418 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 LRRC23Q53EV4 343 aaPredicted RBP8.85□□□□□ -0.99
DDB1-213ENST00000539332 LVRNQ6Q4G3 990 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 STRA8Q7Z7C7 330 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 CLEC14AQ86T13 490 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 ADIPOR2Q86V24 386 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 ZC3HC1Q86WB0 502 aaKnown RBP8.85□□□□□ -0.99
DDB1-213ENST00000539332 CPA6Q8N4T0 437 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 DCLK2Q8N568 766 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 FAM81AQ8TBF8 368 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 BRSK1Q8TDC3 778 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 LZICQ8WZA0 190 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 VOPP1Q96AW1 172 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 ISG20Q96AZ6 181 aaKnown RBP8.85□□□□□ -0.99
DDB1-213ENST00000539332 SLC7A6OSQ96CW6 309 aaPredicted RBP8.85□□□□□ -0.99
DDB1-213ENST00000539332 VPS39Q96JC1 886 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 EXOC2Q96KP1 924 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 PAIP2Q9BPZ3 127 aaKnown RBP8.85□□□□□ -0.99
DDB1-213ENST00000539332 PHF7Q9BWX1 381 aaPredicted RBP8.85□□□□□ -0.99
DDB1-213ENST00000539332 VPS11Q9H270 941 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 IARS2Q9NSE4 1012 aaKnown RBP8.85□□□□□ -0.99
DDB1-213ENST00000539332 SLC17A7Q9P2U7 560 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 STX18Q9P2W9 335 aaKnown RBP8.85□□□□□ -0.99
DDB1-213ENST00000539332 ZFP69BQ9UJL9 534 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 ANGPTL2Q9UKU9 493 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 PLLPQ9Y342 182 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 PLXNA2O75051 1894 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 VCANP13611 3396 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 COPEO14579 308 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 TPP1O14773 563 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 HTRA2O43464 458 aaPredicted RBP8.84□□□□□ -0.99
DDB1-213ENST00000539332 VAPBO95292 243 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 CISD3P0C7P0 127 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 TARSP26639 723 aaKnown RBP8.84□□□□□ -0.99
DDB1-213ENST00000539332 GABRB3P28472 473 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 SLC1A2P43004 574 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 MAPK8P45983 427 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 DGKGP49619 791 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 SERPINB8P50452 374 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 SCNN1BP51168 640 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 MESP2Q0VG99 397 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 SF3A3Q12874 501 aaKnown RBP eCLIP8.84□□□□□ -0.994e-6■■■■□ 22.2
DDB1-213ENST00000539332 ILF2Q12905 390 aaKnown RBP8.84□□□□□ -0.99
DDB1-213ENST00000539332 PDE1CQ14123 709 aaPredicted RBP8.84□□□□□ -0.99
DDB1-213ENST00000539332 GALNT3Q14435 633 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 DBN1Q16643 649 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 GEN1Q17RS7 908 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 INSCQ1MX18 579 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 AAK1Q2M2I8 961 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 SH2D4BQ5SQS7 431 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 FAM91A1Q658Y4 838 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 FSTL4Q6MZW2 842 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 KDELC2Q7Z4H8 507 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 GPR150Q8NGU9 434 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 MIPOL1Q8TD10 442 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 CALML6Q8TD86 181 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 STYXQ8WUJ0 223 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 SCG3Q8WXD2 468 aaKnown RBP8.84□□□□□ -0.99
DDB1-213ENST00000539332 EZH1Q92800 747 aaPredicted RBP8.84□□□□□ -0.99
DDB1-213ENST00000539332 PTPRN2Q92932 1015 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 C19orf43Q9BQ61 176 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 BTBD10Q9BSF8 475 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 DENND2DQ9H6A0 471 aaPredicted RBP8.84□□□□□ -0.99
DDB1-213ENST00000539332 BRD9Q9H8M2 597 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 MLXIPLQ9NP71 852 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 SNX15Q9NRS6 342 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 NMRK1Q9NWW6 199 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.84□□□□□ -0.99
DDB1-213ENST00000539332 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.84□□□□□ -0.99
DDB1-213ENST00000539332 TXNDC16Q9P2K2 825 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 LIMD1Q9UGP4 676 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 HAO1Q9UJM8 370 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 SLC27A6Q9Y2P4 619 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 FCF1Q9Y324 198 aaKnown RBP8.84□□□□□ -0.99
DDB1-213ENST00000539332 RAI2Q9Y5P3 530 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 COL4A2P08572 1712 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 LRRK1Q38SD2 2015 aa8.84□□□□□ -0.99
DDB1-213ENST00000539332 F8W8V4 182 aa8.84□□□□□ -1
DDB1-213ENST00000539332 K7ERQ8 282 aa8.84□□□□□ -1
DDB1-213ENST00000539332 SMAD6O43541 496 aaKnown RBP8.84□□□□□ -1
DDB1-213ENST00000539332 DNAJC6O75061 913 aa8.84□□□□□ -1
DDB1-213ENST00000539332 GLRA3O75311 464 aa8.84□□□□□ -1
DDB1-213ENST00000539332 IL1BP01584 269 aa8.84□□□□□ -1
DDB1-213ENST00000539332 SRCP12931 536 aa8.84□□□□□ -1
DDB1-213ENST00000539332 GJA4P35212 333 aa8.84□□□□□ -1
DDB1-213ENST00000539332 CTSOP43234 321 aaPredicted RBP8.84□□□□□ -1
DDB1-213ENST00000539332 SLC6A11P48066 632 aa8.84□□□□□ -1
DDB1-213ENST00000539332 ARSDP51689 593 aa8.84□□□□□ -1
DDB1-213ENST00000539332 RPL26P61254 145 aaKnown RBP8.84□□□□□ -1
DDB1-213ENST00000539332 RHOAP61586 193 aa8.84□□□□□ -1
DDB1-213ENST00000539332 TFF2Q03403 129 aa8.84□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms