RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ABCG8Q9H221 673 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 NHEJ1Q9H9Q4 299 aaPredicted RBP22.14■■□□□ 1.13
SCARB1-206ENST00000539320 SLC17A4Q9Y2C5 497 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 RNF215Q9Y6U7 377 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 CDRT15L2A8MXV6 281 aa22.13■■□□□ 1.13
SCARB1-206ENST00000539320 TMX2-CTNND1H3BSU7 103 aa22.13■■□□□ 1.13
SCARB1-206ENST00000539320 MTA2O94776 668 aa22.13■■□□□ 1.13
SCARB1-206ENST00000539320 PYGLP06737 847 aa22.13■■□□□ 1.13
SCARB1-206ENST00000539320 IVLP07476 585 aa22.13■■□□□ 1.13
SCARB1-206ENST00000539320 PNLIPP16233 465 aa22.13■■□□□ 1.13
SCARB1-206ENST00000539320 INHBCP55103 352 aa22.13■■□□□ 1.13
SCARB1-206ENST00000539320 RPL26P61254 145 aaKnown RBP22.13■■□□□ 1.13
SCARB1-206ENST00000539320 EIF3IQ13347 325 aaKnown RBP22.13■■□□□ 1.13
SCARB1-206ENST00000539320 COL9A2Q14055 689 aaPredicted RBP22.13■■□□□ 1.13
SCARB1-206ENST00000539320 BROXQ5VW32 411 aa22.13■■□□□ 1.13
SCARB1-206ENST00000539320 VSIG1Q86XK7 387 aa22.13■■□□□ 1.13
SCARB1-206ENST00000539320 PLD5Q8N7P1 536 aa22.13■■□□□ 1.13
SCARB1-206ENST00000539320 PTCD2Q8WV60 388 aaKnown RBP22.13■■□□□ 1.13
SCARB1-206ENST00000539320 TMEM74Q96NL1 305 aa22.13■■□□□ 1.13
SCARB1-206ENST00000539320 FOXP3Q9BZS1 431 aa22.13■■□□□ 1.13
SCARB1-206ENST00000539320 PCDH9Q9HC56 1237 aa22.13■■□□□ 1.13
SCARB1-206ENST00000539320 RPL26L1Q9UNX3 145 aaKnown RBP22.13■■□□□ 1.13
SCARB1-206ENST00000539320 PLD2O14939 933 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 NUDT21O43809 227 aaKnown RBP22.12■■□□□ 1.13
SCARB1-206ENST00000539320 TNFSF15O95150 251 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 PRLP01236 227 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 FUCA1P04066 466 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 KRT1P04264 644 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 ITGA2BP08514 1039 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 CCKBRP32239 447 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 ARHGAP25P42331 645 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 UCNP55089 124 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 MAZP56270 477 aaKnown RBP22.12■■□□□ 1.13
SCARB1-206ENST00000539320 CXADRP78310 365 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 IFI35P80217 286 aaPredicted RBP22.12■■□□□ 1.13
SCARB1-206ENST00000539320 SKOR1P84550 965 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 PTSQ03393 145 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 PPIDQ08752 370 aaKnown RBP22.12■■□□□ 1.13
SCARB1-206ENST00000539320 GPR155Q7Z3F1 870 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 CLEC14AQ86T13 490 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 NRROSQ86YC3 692 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 CNGA4Q8IV77 575 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 ZDHHC1Q8WTX9 485 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 SCAMP4Q969E2 229 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 SPATS2LQ9NUQ6 558 aaKnown RBP22.12■■□□□ 1.13
SCARB1-206ENST00000539320 TAAR2Q9P1P5 351 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 LRIT1Q9P2V4 623 aa22.12■■□□□ 1.13
SCARB1-206ENST00000539320 BAHCC1Q9P281 2608 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 EIF4E1BA6NMX2 242 aaKnown RBP22.11■■□□□ 1.13
SCARB1-206ENST00000539320 KCNK1O00180 336 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 APOL1O14791 398 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 JCHAINP01591 159 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 AK4P27144 223 aaPredicted RBP22.11■■□□□ 1.13
SCARB1-206ENST00000539320 POLD2P49005 469 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 TMPRSS3P57727 454 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 ZBTB17Q13105 803 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 SLC9A4Q6AI14 798 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 SLC30A9Q6PML9 568 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 TRIM74Q86UV6 250 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 NLRP8Q86W28 1048 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 NRSN1Q8IZ57 195 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 FBXO39Q8N4B4 442 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 OR2M4Q96R27 311 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 LYSMD1Q96S90 227 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 ANP32EQ9BTT0 268 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 DPH1Q9BZG8 443 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 CDH19Q9H159 772 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 ATXN7L1Q9ULK2 861 aaPredicted RBP22.11■■□□□ 1.13
SCARB1-206ENST00000539320 HEY1Q9Y5J3 304 aa22.11■■□□□ 1.13
SCARB1-206ENST00000539320 C3orf70A6NLC5 250 aaPredicted RBP22.1■■□□□ 1.13
SCARB1-206ENST00000539320 KLK10O43240 276 aa22.1■■□□□ 1.13
SCARB1-206ENST00000539320 ADCY8P40145 1251 aa22.1■■□□□ 1.13
SCARB1-206ENST00000539320 CD86P42081 329 aa22.1■■□□□ 1.13
SCARB1-206ENST00000539320 CTBSQ01459 385 aa22.1■■□□□ 1.13
SCARB1-206ENST00000539320 LRRC38Q5VT99 294 aa22.1■■□□□ 1.13
SCARB1-206ENST00000539320 RAB11FIP2Q7L804 512 aa22.1■■□□□ 1.13
SCARB1-206ENST00000539320 C17orf82Q86X59 251 aaPredicted RBP22.1■■□□□ 1.13
SCARB1-206ENST00000539320 RAVER1Q8IY67 606 aaKnown RBP22.1■■□□□ 1.13
SCARB1-206ENST00000539320 CCDC97Q96F63 343 aaPredicted RBP22.1■■□□□ 1.13
SCARB1-206ENST00000539320 SCARF2Q96GP6 870 aaPredicted RBP22.1■■□□□ 1.13
SCARB1-206ENST00000539320 RIOK2Q9BVS4 552 aaKnown RBP22.1■■□□□ 1.13
SCARB1-206ENST00000539320 C1orf232A0A0U1RR37 186 aa22.09■■□□□ 1.13
SCARB1-206ENST00000539320 TEX51A0A1B0GUA7 166 aa22.09■■□□□ 1.13
SCARB1-206ENST00000539320 CLDN7O95471 211 aa22.09■■□□□ 1.13
SCARB1-206ENST00000539320 MMP2P08253 660 aa22.09■■□□□ 1.13
SCARB1-206ENST00000539320 UGT1A5P35504 534 aa22.09■■□□□ 1.13
SCARB1-206ENST00000539320 PEX6Q13608 980 aa22.09■■□□□ 1.13
SCARB1-206ENST00000539320 PDK1Q15118 436 aa22.09■■□□□ 1.13
SCARB1-206ENST00000539320 QPCTQ16769 361 aa22.09■■□□□ 1.13
SCARB1-206ENST00000539320 MAP9Q49MG5 647 aa22.09■■□□□ 1.13
SCARB1-206ENST00000539320 ZNF438Q7Z4V0 828 aa22.09■■□□□ 1.13
SCARB1-206ENST00000539320 CNTD1Q8N815 330 aa22.09■■□□□ 1.13
SCARB1-206ENST00000539320 OLFM3Q96PB7 478 aa22.09■■□□□ 1.13
SCARB1-206ENST00000539320 AGAP2Q99490 1192 aa22.09■■□□□ 1.13
SCARB1-206ENST00000539320 MAK16Q9BXY0 300 aaKnown RBP22.09■■□□□ 1.13
SCARB1-206ENST00000539320 INTUQ9ULD6 942 aa22.09■■□□□ 1.13
SCARB1-206ENST00000539320 TMEM98Q9Y2Y6 226 aa22.09■■□□□ 1.13
SCARB1-206ENST00000539320 RHPN2P1A8MT19 583 aa22.08■■□□□ 1.13
SCARB1-206ENST00000539320 AKR1B15C9JRZ8 316 aaPredicted RBP22.08■■□□□ 1.13
SCARB1-206ENST00000539320 PPP1R12AO14974 1030 aaPredicted RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms