RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CACNG1Q06432 222 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CBLBQ13191 982 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CAMK2BQ13554 666 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 ITGA9Q13797 1035 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 EFTUD2Q15029 972 aaKnown RBP eCLIP10.64□□□□□ -0.719e-7■■■■■ 38
TNFRSF1A-211ENST00000538363 SEPT7Q16181 437 aaKnown RBP10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 SETMARQ53H47 684 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 GRTP1Q5TC63 336 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 LYPLAL1Q5VWZ2 237 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 ZNF470Q6ECI4 717 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 ANO7Q6IWH7 933 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 TRMT10BQ6PF06 316 aaKnown RBP10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 Q6ZS52 159 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 SYT13Q7L8C5 426 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 IQCKQ8N0W5 287 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CNPY4Q8N129 248 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 RIBC1Q8N443 379 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 TTC30BQ8N4P2 665 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 ZNF398Q8TD17 642 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 DCUN1D1Q96GG9 259 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 ZNF778Q96MU6 729 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 TSNARE1Q96NA8 513 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 MCCC1Q96RQ3 725 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 UHRF1Q96T88 793 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 PAFAH2Q99487 392 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CPNE1Q99829 537 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 SLC6A17Q9H1V8 727 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 FAM96AQ9H5X1 160 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 SUDS3Q9H7L9 328 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 IL17CQ9P0M4 197 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CD84Q9UIB8 345 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 ITM2BQ9Y287 266 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 VPS9D1Q9Y2B5 631 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 PPIL1Q9Y3C6 166 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 ZCWPW2A0A1B0GU75 182 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 A0A1W2PQF6 199 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 RGSL1A5PLK6 1076 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 OR51F1A6NGY5 319 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CHURC1-FNTBB4DL54 471 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 F8W8V4 182 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 RNGTTO60942 597 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 PIAS1O75925 651 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 RALBP11234 206 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CNTFP26441 200 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 OXTRP30559 389 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 GP5P40197 560 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CXCL12P48061 93 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 SPINT3P49223 89 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 ZNF140P52738 457 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 METAP1P53582 386 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 PTSQ03393 145 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 ZNF844Q08AG5 666 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 SIGLEC14Q08ET2 396 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 ILF2Q12905 390 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CTBP1Q13363 440 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 FRG1Q14331 258 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 TMEM52BQ4KMG9 183 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 ZNF449Q6P9G9 518 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 LIPIQ6XZB0 460 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 USP30Q70CQ3 517 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CYS1Q717R9 158 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 UNC5BQ8IZJ1 945 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 AADATQ8N5Z0 425 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 GPATCH11Q8N954 259 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 PJA1Q8NG27 643 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 ULK4Q96C45 1275 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 AP2M1Q96CW1 435 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 NUS1Q96E22 293 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 ATXN7L3BQ96GX2 97 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 HHIPQ96QV1 700 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 LYSMD1Q96S90 227 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 WDR83Q9BRX9 315 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 OSBPL6Q9BZF3 934 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 MKRN2Q9H000 416 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 BTBD1Q9H0C5 482 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CDH19Q9H159 772 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CD320Q9NPF0 282 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 TREX1Q9NSU2 369 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 SPATA6Q9NWH7 488 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 ZNF446Q9NWS9 450 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 KCTD5Q9NXV2 234 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 MOCS1Q9NZB8 636 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 FBXO5Q9UKT4 447 aa10.63□□□□□ -0.71
TNFRSF1A-211ENST00000538363 FAM159BA6NKW6 160 aa10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CXorf49A8MYA2 514 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CFAP99D6REC4 459 aa10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 H0Y858 1186 aa10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 PSMD11O00231 422 aa10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 MAP2K7O14733 419 aa10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 DCXO43602 365 aa10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 SRP72O76094 671 aaKnown RBP10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 PRAMEF1O95521 474 aa10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 APBB3O95704 486 aa10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 DCNP07585 359 aaKnown RBP10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 SNRPAP09012 282 aaKnown RBP10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 C1SP09871 688 aa10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 BPIP17213 487 aa10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 GABRG2P18507 467 aa10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 NDUFV2P19404 249 aa10.62□□□□□ -0.71
TNFRSF1A-211ENST00000538363 AKT1P31749 480 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms