RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CCDC38Q502W7 563 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 STPG1Q5TH74 334 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 PNCKQ6P2M8 343 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 ZNF572Q7Z3I7 529 aaPredicted RBP13.04□□□□□ -0.32
CHFR-216ENST00000538235 HEATR4Q86WZ0 1026 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 GATAD2AQ86YP4 633 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 MPP5Q8N3R9 675 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 LRRN4CLQ8ND94 238 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 ATL2Q8NHH9 583 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 CEP76Q8TAP6 659 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 OR1E3Q8WZA6 343 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 KLHDC7BQ96G42 594 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 WDR83Q9BRX9 315 aaKnown RBP13.04□□□□□ -0.32
CHFR-216ENST00000538235 APOOQ9BUR5 198 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 GAREM1Q9H706 876 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 LRRC40Q9H9A6 602 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 ZFYVE1Q9HBF4 777 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 ARFGAP3Q9NP61 516 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 HAUS2Q9NVX0 235 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 UCKL1Q9NWZ5 548 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 NFKBIL1Q9UBC1 381 aaPredicted RBP13.04□□□□□ -0.32
CHFR-216ENST00000538235 PCYOX1Q9UHG3 505 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 TPX2Q9ULW0 747 aaKnown RBP13.04□□□□□ -0.32
CHFR-216ENST00000538235 AAR2Q9Y312 384 aaKnown RBP13.04□□□□□ -0.32
CHFR-216ENST00000538235 PCNX2A6NKB5 2137 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 SPTY2D1-AS1A0A0U1RR47 76 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 A0A1B0GTQ1 180 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 C4orf47A7E2U8 309 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 FPGTO14772 594 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 TM4SF5O14894 197 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 INPP4BO15327 924 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 APRTP07741 180 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 POLD2P49005 469 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 BASP1P80723 227 aaKnown RBP13.03□□□□□ -0.32
CHFR-216ENST00000538235 XIAPP98170 497 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 CDK3Q00526 305 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 DPTQ07507 201 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 PTK6Q13882 451 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 PRPSAP1Q14558 356 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 STAT4Q14765 748 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 POU6F1Q14863 301 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 NFATC4Q14934 902 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 TCEA2Q15560 299 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 ALG11Q2TAA5 492 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 ZNF765Q7L2R6 523 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 GSTA5Q7RTV2 222 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 GLT6D1Q7Z4J2 308 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 CAND1Q86VP6 1230 aaKnown RBP13.03□□□□□ -0.32
CHFR-216ENST00000538235 IQCHQ86VS3 1027 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 ZSCAN30Q86W11 494 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 JAMLQ86YT9 394 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 SFTPA2Q8IWL1 248 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 SPATA4Q8NEY3 305 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 AP2M1Q96CW1 435 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 COX14Q96I36 57 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 DNAJC1Q96KC8 554 aaKnown RBP13.03□□□□□ -0.32
CHFR-216ENST00000538235 PWWP2AQ96N64 755 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 CAMK1GQ96NX5 476 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 NUSAP1Q9BXS6 441 aaKnown RBP13.03□□□□□ -0.32
CHFR-216ENST00000538235 TEX101Q9BY14 249 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 FRMD8Q9BZ67 464 aaPredicted RBP13.03□□□□□ -0.32
CHFR-216ENST00000538235 GPR63Q9BZJ6 419 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 EIF2B3Q9NR50 452 aaKnown RBP13.03□□□□□ -0.32
CHFR-216ENST00000538235 DNAAF2Q9NVR5 837 aaKnown RBP13.03□□□□□ -0.32
CHFR-216ENST00000538235 SLC2A6Q9UGQ3 507 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 FKBPLQ9UIM3 349 aa13.03□□□□□ -0.32
CHFR-216ENST00000538235 PRR5-ARHGAP8B1AHC4 643 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 RAD51CO43502 376 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 AVILO75366 819 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 BANF1O75531 89 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 TPSB2P20231 275 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 EPHA8P29322 1005 aaPredicted RBP13.02□□□□□ -0.33
CHFR-216ENST00000538235 HMGCLP35914 325 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 DPP6P42658 865 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 RABIFP47224 123 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 CDKN1CP49918 316 aaPredicted RBP13.02□□□□□ -0.33
CHFR-216ENST00000538235 KIAA1024LP59773 190 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 DCDC1P59894 354 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 PEX6Q13608 980 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 TRADDQ15628 312 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 TPSAB1Q15661 275 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 RNASEH2BQ5TBB1 312 aaKnown RBP13.02□□□□□ -0.33
CHFR-216ENST00000538235 RAET1GQ6H3X3 334 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 MACC1Q6ZN28 852 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 NAT8LQ8N9F0 302 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 OR4K2Q8NGD2 314 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 TSACCQ96A04 125 aaPredicted RBP13.02□□□□□ -0.33
CHFR-216ENST00000538235 KRT12Q99456 494 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 NAP1L3Q99457 506 aaPredicted RBP13.02□□□□□ -0.33
CHFR-216ENST00000538235 ELF4Q99607 663 aaPredicted RBP13.02□□□□□ -0.33
CHFR-216ENST00000538235 IL26Q9NPH9 171 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 HOMER3Q9NSC5 361 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 CDC23Q9UJX2 597 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 PLEKHM1Q9Y4G2 1056 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 MRFAP1Q9Y605 127 aa13.02□□□□□ -0.33
CHFR-216ENST00000538235 CNOT1A5YKK6 2376 aaKnown RBP13.02□□□□□ -0.33
CHFR-216ENST00000538235 PTPRBP23467 1997 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 ASXL3Q9C0F0 2248 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 GOLGA6CA6NDK9 693 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 GOLGA6BA6NDN3 693 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms