RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 RECQL5O94762 991 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-217ENST00000537162 UNC5CO95185 931 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 FOLR1P15328 257 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 ZNF169Q14929 603 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-217ENST00000537162 TAF5Q15542 800 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 LONRF1Q17RB8 773 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 RETSATQ6NUM9 610 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 TMEM207Q6UWW9 146 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 PLPP6Q8IY26 295 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 OR2AP1Q8NGE2 309 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 DNAJB14Q8TBM8 379 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 TAAR6Q96RI8 345 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 OSBPL1AQ9BXW6 950 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 IMPG2Q9BZV3 1241 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 DNAI2Q9GZS0 605 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 WDR26Q9H7D7 661 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 MMRN2Q9H8L6 949 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 ATP13A1Q9HD20 1204 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 DMAC2Q9NW81 257 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 SLC12A6Q9UHW9 1150 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 ZANQ9Y493 2812 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 NUP210LQ5VU65 1888 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 TLCD2A6NGC4 264 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 INSIG1O15503 277 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 PAGE1O75459 146 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 POP4O95707 220 aaKnown RBP9.39□□□□□ -0.91
CPSF7-217ENST00000537162 CAPN1P07384 714 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 MYCLP1P12525 358 aaPredicted RBP9.39□□□□□ -0.91
CPSF7-217ENST00000537162 TYRP1P17643 537 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 IGFBP2P18065 325 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 ACVRL1P37023 503 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 MMP12P39900 470 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 C3AR1Q16581 482 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 PNCKQ6P2M8 343 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 CERS6Q6ZMG9 384 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 SETD3Q86TU7 594 aaPredicted RBP9.39□□□□□ -0.91
CPSF7-217ENST00000537162 ZSWIM9Q86XI8 627 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 PLXDC1Q8IUK5 500 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 BCORP1Q8N888 145 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 FAM184AQ8NB25 1140 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 PPP4R1Q8TF05 950 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 TM9SF4Q92544 642 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 ISG20Q96AZ6 181 aaKnown RBP9.39□□□□□ -0.91
CPSF7-217ENST00000537162 CNDP1Q96KN2 507 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 ALPK1Q96QP1 1244 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 TKTL2Q9H0I9 626 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 ZNF358Q9NW07 568 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 ZNF212Q9UDV6 495 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 ZNHIT2Q9UHR6 403 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 TINAGQ9UJW2 476 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 CCDC88CQ9P219 2028 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 TGP01266 2768 aa9.39□□□□□ -0.91
CPSF7-217ENST00000537162 TRIM49BA6NDI0 452 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 IKBKBO14920 756 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 EPB41L2O43491 1005 aaKnown RBP9.38□□□□□ -0.91
CPSF7-217ENST00000537162 RASSF9O75901 435 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 FBXO21O94952 628 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 PIGNO95427 931 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 GSRP00390 522 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 MST1P26927 711 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 OR1E1P30953 314 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 OTX2P32243 289 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 CCR1P32246 355 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 SMSP52788 366 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 EPHA4P54764 986 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 SNRPFP62306 86 aaKnown RBP9.38□□□□□ -0.91
CPSF7-217ENST00000537162 SLC20A2Q08357 652 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 ELP6Q0PNE2 266 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 RALGDSQ12967 914 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 TUBB3Q13509 450 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 PRAMEF17Q5VTA0 474 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 LCLAT1Q6UWP7 414 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 MRGPREQ86SM8 312 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 KRTAP1-3Q8IUG1 177 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 TMEM151BQ8IW70 566 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 CIARTQ8N365 385 aaPredicted RBP9.38□□□□□ -0.91
CPSF7-217ENST00000537162 GUF1Q8N442 669 aaKnown RBP9.38□□□□□ -0.91
CPSF7-217ENST00000537162 CATSPER1Q8NEC5 780 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 FNIP1Q8TF40 1166 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 NR4A3Q92570 626 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 ARHGEF2Q92974 986 aaKnown RBP9.38□□□□□ -0.91
CPSF7-217ENST00000537162 CLIC6Q96NY7 704 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 LLPHQ9BRT6 129 aaKnown RBP9.38□□□□□ -0.91
CPSF7-217ENST00000537162 TRIM56Q9BRZ2 755 aaKnown RBP9.38□□□□□ -0.91
CPSF7-217ENST00000537162 MLPHQ9BV36 600 aaPredicted RBP9.38□□□□□ -0.91
CPSF7-217ENST00000537162 FAM204AQ9H8W3 233 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 SARS2Q9NP81 518 aaKnown RBP9.38□□□□□ -0.91
CPSF7-217ENST00000537162 NPDC1Q9NQX5 325 aaPredicted RBP9.38□□□□□ -0.91
CPSF7-217ENST00000537162 DDIT4Q9NX09 232 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 CCDC39Q9UFE4 941 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.38□□□□□ -0.91
CPSF7-217ENST00000537162 PCYT1BQ9Y5K3 369 aaPredicted RBP9.38□□□□□ -0.91
CPSF7-217ENST00000537162 SLC30A1Q9Y6M5 507 aa9.38□□□□□ -0.91
CPSF7-217ENST00000537162 DOCK10Q96BY6 2186 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 M0QYV0 167 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 ATMINO43313 823 aaPredicted RBP9.37□□□□□ -0.91
CPSF7-217ENST00000537162 IPO13O94829 963 aaKnown RBP9.37□□□□□ -0.91
CPSF7-217ENST00000537162 SLCO2B1O94956 709 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 RAB40ALP0C0E4 278 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 VDRP11473 427 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms