RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 HEMGNQ9BXL5 484 aa17.84■□□□□ 0.45
TNFRSF1A-209ENST00000536717 PCDH9Q9HC56 1237 aa17.84■□□□□ 0.45
TNFRSF1A-209ENST00000536717 DKK4Q9UBT3 224 aa17.84■□□□□ 0.45
TNFRSF1A-209ENST00000536717 CLCA2Q9UQC9 943 aa17.84■□□□□ 0.45
TNFRSF1A-209ENST00000536717 CHD6Q8TD26 2715 aa17.84■□□□□ 0.45
TNFRSF1A-209ENST00000536717 TNFRSF10CO14798 259 aa17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 PPP1R12AO14974 1030 aaPredicted RBP17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 OPA1O60313 960 aa17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 ATP1A1P05023 1023 aaKnown RBP17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 TGM2P21980 687 aa17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 CD86P42081 329 aa17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 EPHB1P54762 984 aa17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 SKOR1P84550 965 aa17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 PTSQ03393 145 aa17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 AADACL2Q6P093 401 aa17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 HEATR4Q86WZ0 1026 aa17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 DCBLD1Q8N8Z6 715 aa17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 WDR24Q96S15 920 aa17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 RBM15Q96T37 977 aaKnown RBP eCLIP17.83■□□□□ 0.459e-7■■■■□ 22.2
TNFRSF1A-209ENST00000536717 TEX101Q9BY14 249 aa17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 EVA1BQ9NVM1 165 aa17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 NCKIPSDQ9NZQ3 722 aa17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 SAE1Q9UBE0 346 aaPredicted RBP17.83■□□□□ 0.45
TNFRSF1A-209ENST00000536717 CTAGE9A4FU28 777 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 CAPN8A6NHC0 703 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 TNFP01375 233 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 MYCLP1P12525 358 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 PECAM1P16284 738 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 ZNF30P17039 623 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 KELP23276 732 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 RPL26P61254 145 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 ETF1P62495 437 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 CDK3Q00526 305 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 DPTQ07507 201 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 CYP4F3Q08477 520 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 NR0B2Q15466 257 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 CDCP2Q5VXM1 449 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 BBS12Q6ZW61 710 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 BZW1Q7L1Q6 419 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 EFL1Q7Z2Z2 1120 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 SDR16C5Q8N3Y7 309 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 LPCAT1Q8NF37 534 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 LYSMD1Q96S90 227 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 NAPGQ99747 312 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 CD84Q9UIB8 345 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 RPL26L1Q9UNX3 145 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 ADAMTS20P59510 1910 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 CPED1A4D0V7 1026 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 MT-CO3P00414 261 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 SOD1P00441 154 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 CA4P22748 312 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 TEAD1P28347 426 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 CXCR5P32302 372 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 NR2C2P49116 596 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 PERM1Q5SV97 790 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 RAET1GQ6H3X3 334 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 LVRNQ6Q4G3 990 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 P3H4Q92791 437 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 AGAP3Q96P47 875 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 BRD8Q9H0E9 1235 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 TMEM168Q9H0V1 697 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 ABCG8Q9H221 673 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 PHPT1Q9NRX4 125 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 SEPT10Q9P0V9 454 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 DOLKQ9UPQ8 538 aa17.82■□□□□ 0.44
TNFRSF1A-209ENST00000536717 FAM208BQ5VWN6 2430 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 PRSS38A1L453 326 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 GOLGA6CA6NDK9 693 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 GOLGA6BA6NDN3 693 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 ANKRD66B4E2M5 251 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 PDE2AO00408 941 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 CEP104O60308 925 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 CLDN7O95471 211 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 FUCA1P04066 466 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 GOLGA6DP0CG33 693 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 STC1P52823 247 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 PRKD1Q15139 912 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 QPCTQ16769 361 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 GKN2Q86XP6 184 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 GLMNQ92990 594 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 SCAMP4Q969E2 229 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 IMP4Q96G21 291 aaKnown RBP17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 PBKQ96KB5 322 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 C16orf45Q96MC5 204 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 FRMD8Q9BZ67 464 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 CYP4F12Q9HCS2 524 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 GOLGA6AQ9NYA3 693 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 SNX12Q9UMY4 172 aa17.81■□□□□ 0.44
TNFRSF1A-209ENST00000536717 APOC4-APOC2K7ER74 178 aa17.8■□□□□ 0.44
TNFRSF1A-209ENST00000536717 CASC3O15234 703 aaKnown RBP17.8■□□□□ 0.44
TNFRSF1A-209ENST00000536717 APOC2P02655 101 aa17.8■□□□□ 0.44
TNFRSF1A-209ENST00000536717 CEACAM5P06731 702 aa17.8■□□□□ 0.44
TNFRSF1A-209ENST00000536717 TCP1P17987 556 aaKnown RBP17.8■□□□□ 0.44
TNFRSF1A-209ENST00000536717 PTPN3P26045 913 aa17.8■□□□□ 0.44
TNFRSF1A-209ENST00000536717 TEX44Q53QW1 395 aa17.8■□□□□ 0.44
TNFRSF1A-209ENST00000536717 NLRP8Q86W28 1048 aa17.8■□□□□ 0.44
TNFRSF1A-209ENST00000536717 SLC13A5Q86YT5 568 aaPredicted RBP17.8■□□□□ 0.44
TNFRSF1A-209ENST00000536717 ARL10Q8N8L6 244 aa17.8■□□□□ 0.44
TNFRSF1A-209ENST00000536717 KYQ8NBH2 561 aa17.8■□□□□ 0.44
TNFRSF1A-209ENST00000536717 CCL4L1Q8NHW4 92 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms