RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SFSWAPQ12872 951 aaKnown RBP12.3□□□□□ -0.44
SCARB1-204ENST00000535005 MTAPQ13126 283 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 GALNT3Q14435 633 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 LRRC14Q15048 493 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 HIF1AQ16665 826 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 ANO7Q6IWH7 933 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 CGB2Q6NT52 195 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 ERN2Q76MJ5 926 aaKnown RBP12.3□□□□□ -0.44
SCARB1-204ENST00000535005 BMP8AQ7Z5Y6 402 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 DNAAF3Q8N9W5 541 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 LRRC39Q96DD0 335 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 SIPA1Q96FS4 1042 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 TRABDQ9H4I3 376 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 MAGEE1Q9HCI5 957 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 DYRK4Q9NR20 520 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.3□□□□□ -0.441e-7■■□□□ 11.9
SCARB1-204ENST00000535005 POLR3BQ9NW08 1133 aaPredicted RBP12.3□□□□□ -0.44
SCARB1-204ENST00000535005 C2orf42Q9NWW7 574 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 BFARQ9NZS9 450 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 HACD3Q9P035 362 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 LRCH1Q9Y2L9 728 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 A0A0C4DFX4 3053 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 ANKRD36A6QL64 1941 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 VCANP13611 3396 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 TCRBV21S2A2A0A5A6 115 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 SDR42E2A6NKP2 422 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 A8MUI8 341 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 MID1O15344 667 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 PI15O43692 258 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 ALDH1A2O94788 518 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 NDUFV2P19404 249 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 DRD3P35462 400 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 NEK3P51956 506 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 METAP1P53582 386 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 MXRA7P84157 204 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 OCRLQ01968 901 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 FNBP1LQ5T0N5 605 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 USP30Q70CQ3 517 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 TTC7BQ86TV6 843 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 RASSF3Q86WH2 238 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 CAMKK1Q8N5S9 505 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 AADATQ8N5Z0 425 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 PAF1Q8N7H5 531 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 ANKRD42Q8N9B4 389 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 MGARPQ8TDB4 240 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 DNAJC9Q8WXX5 260 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 UTP4Q969X6 686 aaKnown RBP12.3□□□□□ -0.44
SCARB1-204ENST00000535005 DTNBP1Q96EV8 351 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 SIGLEC10Q96LC7 697 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 PWWP2AQ96N64 755 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 TTC25Q96NG3 672 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 RANBP9Q96S59 729 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 FAM192AQ9GZU8 254 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 IL22Q9GZX6 179 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 SSU72Q9NP77 194 aaKnown RBP12.3□□□□□ -0.44
SCARB1-204ENST00000535005 PAPOLBQ9NRJ5 636 aaKnown RBP12.3□□□□□ -0.44
SCARB1-204ENST00000535005 EURLQ9NYK6 297 aa12.3□□□□□ -0.44
SCARB1-204ENST00000535005 MAGEB16A2A368 324 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 CAPN8A6NHC0 703 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 AREL1O15033 823 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 SLC7A4O43246 635 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 AP1G1O43747 822 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 AVILO75366 819 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 ZWINTO95229 277 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 ADRB3P13945 408 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 TPH1P17752 444 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 ADRA1DP25100 572 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 HNF1BP35680 557 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 PEX19P40855 299 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 P2RY2P41231 377 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 CXCL12P48061 93 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 CCR3P51677 355 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 SESN2P58004 480 aaPredicted RBP12.29□□□□□ -0.44
SCARB1-204ENST00000535005 MGAT5Q09328 741 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 CNTN1Q12860 1018 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 DYNC1I2Q13409 638 aaKnown RBP12.29□□□□□ -0.44
SCARB1-204ENST00000535005 CDKN3Q16667 212 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 MSS51Q4VC12 460 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 CERCAMQ5T4B2 595 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 FBXL19Q6PCT2 694 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 USP45Q70EL2 814 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 CENPUQ71F23 418 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 KBTBD6Q86V97 674 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 CCDC25Q86WR0 208 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 HDDC3Q8N4P3 179 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 FAM13CQ8NE31 585 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 TSTD1Q8NFU3 115 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 BRSK1Q8TDC3 778 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 PTCD2Q8WV60 388 aaKnown RBP12.29□□□□□ -0.44
SCARB1-204ENST00000535005 ERLEC1Q96DZ1 483 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 YIPF3Q9GZM5 350 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 MYLK2Q9H1R3 596 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 ITM2CQ9NQX7 267 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 FZD4Q9ULV1 537 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 SPO11Q9Y5K1 396 aa12.29□□□□□ -0.44
SCARB1-204ENST00000535005 ACSL3O95573 720 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 APBB3O95704 486 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 IGLV3-19P01714 112 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 CYP2A6P11509 494 aaPredicted RBP12.28□□□□□ -0.44
SCARB1-204ENST00000535005 CTPS1P17812 591 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms