RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, human

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BEST1-208	ENST00000534553	PABPC1	P11940	636 aa	Known RBP	13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	PKM	P14618	531 aa	Known RBP	13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	CD1D	P15813	335 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	EPCAM	P16422	314 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	NFKBIA	P25963	317 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	ARRB2	P32121	409 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	IDH3A	P50213	366 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	VASP	P50552	380 aa	Predicted RBP	13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	KCNJ2	P63252	427 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	TUBB3	Q13509	450 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	CAMK1	Q14012	370 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	ZDHHC20	Q5W0Z9	365 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	C22orf39	Q6P5X5	142 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	TRIM67	Q6ZTA4	783 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	ISCA2	Q86U28	154 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	CAMK1D	Q8IU85	385 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	EBF4	Q9BQW3	602 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	SMG9	Q9H0W8	520 aa	Known RBP	13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	POMK	Q9H5K3	350 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	COG4	Q9H9E3	785 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	EVL	Q9UI08	416 aa	Predicted RBP	13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	TAGLN3	Q9UI15	199 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	PPIL1	Q9Y3C6	166 aa		13.36	□□□□□ -0.27
BEST1-208	ENST00000534553	GOLGA8Q	A0A0J9YX86	632 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	GOLGA8O	A6NCC3	632 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	TRPC5OS	A6NMA1	111 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	SYCE1L	A8MT33	242 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553		A8MT66	165 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	NEDD8-MDP1	E9PL57	170 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	GOLGA8N	F8WBI6	632 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	DIAPH2	O60879	1101 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	POP4	O95707	220 aa	Known RBP	13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	IRS1	P35568	1242 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	ECT2L	Q008S8	904 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	PEX6	Q13608	980 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	SLC5A9	Q2M3M2	681 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	MYLK3	Q32MK0	819 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	ZRANB3	Q5FWF4	1079 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	ACAD11	Q709F0	780 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	USP45	Q70EL2	814 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	AHI1	Q8N157	1196 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	CELF5	Q8N6W0	485 aa	Known RBP	13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	TXNDC5	Q8NBS9	432 aa	Known RBP	13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	STAG3L4	Q8TBR4	150 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	ANKRD49	Q8WVL7	239 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	ECHDC3	Q96DC8	303 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	L3HYPDH	Q96EM0	354 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	CCDC106	Q9BWC9	280 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	ARL8B	Q9NVJ2	186 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	CLEC4E	Q9ULY5	219 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	SLC8A2	Q9UPR5	921 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	OAS3	Q9Y6K5	1087 aa	Known RBP	13.35	□□□□□ -0.27
BEST1-208	ENST00000534553	ALPK3	Q96L96	1907 aa		13.35	□□□□□ -0.27
BEST1-208	ENST00000534553		H3BMM5	538 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	NRG2	O14511	850 aa	Predicted RBP	13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	ZNF821	O75541	412 aa	Predicted RBP	13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	SLC4A1	P02730	911 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	KRT16	P08779	473 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	TYR	P14679	529 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	ZNF7	P17097	686 aa	Predicted RBP	13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	ITGAL	P20701	1170 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	IMPDH1	P20839	514 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	RPS3	P23396	243 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	PRDX6	P30041	224 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	ADSL	P30566	484 aa	Predicted RBP	13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	NNMT	P40261	264 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	ALDH18A1	P54886	795 aa	Known RBP	13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	POLR2L	P62875	67 aa	Known RBP	13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	XIAP	P98170	497 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	SATB1	Q01826	763 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	SNCB	Q16143	134 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	FUT11	Q495W5	492 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	GPR33	Q49SQ1	333 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	DGKK	Q5KSL6	1271 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	GRAMD4	Q6IC98	578 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	TMEM207	Q6UWW9	146 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	LYSMD3	Q7Z3D4	306 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	TMEM25	Q86YD3	366 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	TMPRSS6	Q8IU80	811 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	RYBP	Q8N488	228 aa	Predicted RBP	13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	SPATA6L	Q8N4H0	392 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	KIF2B	Q8N4N8	673 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	GRIN3A	Q8TCU5	1115 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	CMTM5	Q96DZ9	223 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	CCDC28B	Q9BUN5	200 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	TBC1D10A	Q9BXI6	508 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	C1orf21	Q9H246	121 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	TCF7L2	Q9NQB0	619 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	TRMT6	Q9UJA5	497 aa	Known RBP	13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	MRPS23	Q9Y3D9	190 aa	Known RBP	13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	HCFC2	Q9Y5Z7	792 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	NUMBL	Q9Y6R0	609 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	C1orf232	A0A0U1RR37	186 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	WASH3P	C4AMC7	463 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	SPECC1L-ADORA2A	F8WAN1	911 aa		13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	PRMT5	O14744	637 aa	Predicted RBP	13.34	□□□□□ -0.27
BEST1-208	ENST00000534553	GYG2	O15488	501 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms