RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 B4GALNT1Q00973 533 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 CTBSQ01459 385 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 GBE1Q04446 702 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 ZFP36L1Q07352 338 aaKnown RBP8.88□□□□□ -0.99
COPB1-211ENST00000534234 VAC14Q08AM6 782 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 MESDQ14696 234 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 ASTE1Q2TB18 679 aaPredicted RBP8.88□□□□□ -0.99
COPB1-211ENST00000534234 DOK6Q6PKX4 331 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 SLC30A9Q6PML9 568 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 SPRED1Q7Z699 444 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 CLEC14AQ86T13 490 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 NLRP8Q86W28 1048 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 C17orf82Q86X59 251 aaPredicted RBP8.88□□□□□ -0.99
COPB1-211ENST00000534234 SLC35G2Q8TBE7 412 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 ZDHHC1Q8WTX9 485 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 RAPGEF5Q92565 580 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 FATE1Q969F0 183 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 FAF2Q96CS3 445 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 RNF157Q96PX1 679 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 DNAJC7Q99615 494 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 ZNHIT6Q9NWK9 470 aaKnown RBP8.88□□□□□ -0.99
COPB1-211ENST00000534234 DTLQ9NZJ0 730 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.88□□□□□ -0.99
COPB1-211ENST00000534234 TAAR2Q9P1P5 351 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 SLC17A4Q9Y2C5 497 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 TMEM98Q9Y2Y6 226 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 ST14Q9Y5Y6 855 aa8.88□□□□□ -0.99
COPB1-211ENST00000534234 TDRD6O60522 2096 aaKnown RBP8.88□□□□□ -0.99
COPB1-211ENST00000534234 ASXL3Q9C0F0 2248 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 RHPN2P1A8MT19 583 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 AGRPO00253 132 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 CBFA2T2O43439 604 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 CLDN7O95471 211 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 ECEL1O95672 775 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 CPNE6O95741 557 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 SOD1P00441 154 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 JCHAINP01591 159 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 HLA-DQB2P05538 268 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 PYGLP06737 847 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 IVLP07476 585 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 CA4P22748 312 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 MAN1A1P33908 653 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 MAZP56270 477 aaKnown RBP8.87□□□□□ -0.99
COPB1-211ENST00000534234 OR1D5P58170 312 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 RPL26P61254 145 aaKnown RBP8.87□□□□□ -0.99
COPB1-211ENST00000534234 NIPAL4Q0D2K0 466 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 C19orf57Q0VDD7 668 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 BIRC2Q13490 618 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 PEX6Q13608 980 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 TRIM14Q14142 442 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 SKOR2Q2VWA4 1001 aaPredicted RBP8.87□□□□□ -0.99
COPB1-211ENST00000534234 AMZ1Q400G9 498 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 TAF1BQ53T94 588 aaPredicted RBP8.87□□□□□ -0.99
COPB1-211ENST00000534234 ADAMTSL4Q6UY14 1074 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 USP53Q70EK8 1073 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 ZNF765Q7L2R6 523 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 PIM3Q86V86 326 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 JAMLQ86YT9 394 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 CCDC13Q8IYE1 715 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 NRSN1Q8IZ57 195 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 EXD1Q8NHP7 514 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 SCARF2Q96GP6 870 aaPredicted RBP8.87□□□□□ -0.99
COPB1-211ENST00000534234 AGAP2Q99490 1192 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 CHP1Q99653 195 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 RIOK2Q9BVS4 552 aaKnown RBP8.87□□□□□ -0.99
COPB1-211ENST00000534234 TDRD1Q9BXT4 1180 aaKnown RBP8.87□□□□□ -0.99
COPB1-211ENST00000534234 RDH14Q9HBH5 336 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 PCDH9Q9HC56 1237 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 WDR70Q9NW82 654 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 RPL26L1Q9UNX3 145 aaKnown RBP8.87□□□□□ -0.99
COPB1-211ENST00000534234 PLEKHM1Q9Y4G2 1056 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 PCDHGA7Q9Y5G6 932 aa8.87□□□□□ -0.99
COPB1-211ENST00000534234 LRRD1A4D1F6 860 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 ANKRD66B4E2M5 251 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 KCNK1O00180 336 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 INPP4BO15327 924 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 NVLO15381 856 aaKnown RBP8.86□□□□□ -0.99
COPB1-211ENST00000534234 ZW10O43264 779 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 ASMTLO95671 621 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 TPM1P09493 284 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 ACTR1BP42025 376 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 STC1P52823 247 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 ACTR1AP61163 376 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 RHDQ02161 417 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 CLN3Q13286 438 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 PHF19Q5T6S3 580 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 PCSK4Q6UW60 755 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 CCDC81Q6ZN84 652 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 MARK2Q7KZI7 788 aaKnown RBP8.86□□□□□ -0.99
COPB1-211ENST00000534234 TMPRSS9Q7Z410 1059 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 TRIM74Q86UV6 250 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 SLITRK4Q8IW52 837 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 RAVER1Q8IY67 606 aaKnown RBP8.86□□□□□ -0.99
COPB1-211ENST00000534234 NAGSQ8N159 534 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 CNTD1Q8N815 330 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 LPCAT1Q8NF37 534 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.86□□□□□ -0.99
COPB1-211ENST00000534234 SNRNP27Q8WVK2 155 aaKnown RBP8.86□□□□□ -0.99
COPB1-211ENST00000534234 PATE1Q8WXA2 126 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 TMEM159Q96B96 161 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms