RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 PCDHAC1Q9H158 963 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 FLRT1Q9NZU1 646 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 CD84Q9UIB8 345 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 PPM1HQ9ULR3 514 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 PRPF19Q9UMS4 504 aaKnown RBP12.4□□□□□ -0.42
RAD50-209ENST00000533482 ULK1O75385 1050 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 CNTN5O94779 1100 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 DLDP09622 509 aaKnown RBP12.4□□□□□ -0.42
RAD50-209ENST00000533482 FCGR1AP12314 374 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 ALOX15P16050 662 aaPredicted RBP12.4□□□□□ -0.42
RAD50-209ENST00000533482 CLDN10P78369 228 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 HNRNPDQ14103 355 aaKnown RBP12.4□□□□□ -0.42
RAD50-209ENST00000533482 EMC10Q5UCC4 262 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 DPY19L2P1Q6NXN4 242 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 ZDHHC13Q8IUH4 622 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 TRIM48Q8IWZ4 208 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 C19orf60Q96EN9 201 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 RNF186Q9NXI6 227 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 LNPEPQ9UIQ6 1025 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 NENFQ9UMX5 172 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 SNX8Q9Y5X2 465 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 DHRS12A0PJE2 317 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 GOT2P00505 430 aaKnown RBP12.4□□□□□ -0.42
RAD50-209ENST00000533482 LYNP07948 512 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 PRKCHP24723 683 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 PTPRCAPQ14761 206 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 C16orf72Q14CZ0 275 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 MAPKAPK3Q16644 382 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 PRMT9Q6P2P2 845 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 FRMD7Q6ZUT3 714 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 NAT14Q8WUY8 206 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 OSCP1Q8WVF1 389 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 PANX3Q96QZ0 392 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 SH3GL1Q99961 368 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 DGCR6LQ9BY27 220 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 DNAJC28Q9NX36 388 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 HECAQ9UBI9 543 aaPredicted RBP12.4□□□□□ -0.42
RAD50-209ENST00000533482 CNTN6Q9UQ52 1028 aa12.4□□□□□ -0.42
RAD50-209ENST00000533482 C15orf38-AP3S2A0A0A6YYH1 394 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 SLC38A8A6NNN8 435 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 BLMHQ13867 455 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 TSNQ15631 228 aaKnown RBP12.39□□□□□ -0.43
RAD50-209ENST00000533482 RBM20Q5T481 1227 aaKnown RBP12.39□□□□□ -0.43
RAD50-209ENST00000533482 METTL21CQ5VZV1 264 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 ARPINQ7Z6K5 226 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 CAMK1DQ8IU85 385 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 RELL1Q8IUW5 271 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 TSPAN14Q8NG11 270 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 SUSD3Q96L08 255 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 ZNF778Q96MU6 729 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 PAIP1Q9H074 479 aaKnown RBP12.39□□□□□ -0.43
RAD50-209ENST00000533482 KCTD3Q9Y597 815 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 ARL5AQ9Y689 179 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 LINC00854A0A1B0GVQ3 168 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 A0A1W2PRU2 124 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 ARVCFO00192 962 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 SYN3O14994 580 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 GPR32O75388 356 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 NDST3O95803 873 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 PKMP14618 531 aaKnown RBP12.39□□□□□ -0.43
RAD50-209ENST00000533482 UQCRBP14927 111 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 SLC18A1P54219 525 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 RAD23AP54725 363 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 AQP4P55087 323 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 SPESP1Q6UW49 350 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 RBM44Q6ZP01 1051 aaKnown RBP12.39□□□□□ -0.43
RAD50-209ENST00000533482 APLFQ8IW19 511 aaPredicted RBP12.39□□□□□ -0.43
RAD50-209ENST00000533482 UTP15Q8TED0 518 aaKnown RBP12.39□□□□□ -0.43
RAD50-209ENST00000533482 C9orf16Q9BUW7 83 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 EBF3Q9H4W6 596 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 EIF2B3Q9NR50 452 aaKnown RBP12.39□□□□□ -0.43
RAD50-209ENST00000533482 SLC45A1Q9Y2W3 748 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 ENPP3O14638 875 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 ZNF865P0CJ78 1059 aaPredicted RBP12.39□□□□□ -0.43
RAD50-209ENST00000533482 COL6A2P12110 1019 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 CYP2A7P20853 494 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 DGKAP23743 735 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 BNIPLQ7Z465 357 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 TMCO2Q7Z6W1 182 aaPredicted RBP12.39□□□□□ -0.43
RAD50-209ENST00000533482 C2orf73Q8N5S3 287 aaPredicted RBP12.39□□□□□ -0.43
RAD50-209ENST00000533482 FAM47BQ8NA70 645 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 GLMNQ92990 594 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 NTAN1Q96AB6 310 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 VPS33AQ96AX1 596 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 SLC39A3Q9BRY0 314 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 ZFYVE1Q9HBF4 777 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 FKBPLQ9UIM3 349 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 GNEQ9Y223 722 aaKnown RBP12.39□□□□□ -0.43
RAD50-209ENST00000533482 DYRK1BQ9Y463 629 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 U3KQV3 271 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 NHSL1Q5SYE7 1610 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 PTGESO14684 152 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 RGS14O43566 566 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 SNAP91O60641 907 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 RPP40O75818 363 aaKnown RBP12.39□□□□□ -0.43
RAD50-209ENST00000533482 HSMCR30P0CW71 290 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 PSMB9P28065 219 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 SLC11A1P49279 550 aa12.39□□□□□ -0.43
RAD50-209ENST00000533482 YBEYP58557 167 aaPredicted RBP12.39□□□□□ -0.43
RAD50-209ENST00000533482 DGCR6Q14129 220 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms