RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 DNAJB7Q7Z6W7 309 aaPredicted RBP3.02□□□□□ -1.93
CD44-234ENST00000531873 CEP97Q8IW35 865 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 MB21D2Q8IYB1 491 aaPredicted RBP3.02□□□□□ -1.93
CD44-234ENST00000531873 HACE1Q8IYU2 909 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 SCCPDHQ8NBX0 429 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 SLC44A5Q8NCS7 719 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 OR6J1Q8NGC5 347 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 RMDN1Q96DB5 314 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 LINC00615Q96LM1 132 aaPredicted RBP3.02□□□□□ -1.93
CD44-234ENST00000531873 CRAMP1Q96RY5 1269 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 HAUS8Q9BT25 410 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 QTRT1Q9BXR0 403 aaKnown RBP3.02□□□□□ -1.93
CD44-234ENST00000531873 POLDIP3Q9BY77 421 aaKnown RBP3.02□□□□□ -1.93
CD44-234ENST00000531873 OSGEPL1Q9H4B0 414 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 PPP1R3EQ9H7J1 279 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 CLK4Q9HAZ1 481 aaKnown RBP3.02□□□□□ -1.93
CD44-234ENST00000531873 PSD3Q9NYI0 1048 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 SELENONQ9NZV5 590 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 COPG2Q9UBF2 871 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 SLC9A2Q9UBY0 812 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 PCDHA12Q9UN75 941 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 PPIEQ9UNP9 301 aaKnown RBP3.02□□□□□ -1.93
CD44-234ENST00000531873 ERVK-11Q9UQG0 969 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 TCRBV21S2A2A0A5A6 115 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 LRRC72A6NJI9 287 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 A6NL46 340 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 J3KR12 359 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 SPRY1O43609 319 aaPredicted RBP3.01□□□□□ -1.93
CD44-234ENST00000531873 SLCO2B1O94956 709 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 NDUFB4O95168 129 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 IFNA2P01563 188 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 PRLRP16471 622 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 IFNAR1P17181 557 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 GNLYP22749 145 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 MYF6P23409 242 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 EEF1DP29692 281 aaKnown RBP3.01□□□□□ -1.93
CD44-234ENST00000531873 HOXC9P31274 260 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 MC5RP33032 325 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 PIGAP37287 484 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 MMP14P50281 582 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 METAP2P50579 478 aaKnown RBP eCLIP3.01□□□□□ -1.93
CD44-234ENST00000531873 ADORA2A-AS1P86434 159 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 MTX1Q13505 466 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 ALCAMQ13740 583 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 EIF2S3LQ2VIR3 472 aaKnown RBP3.01□□□□□ -1.93
CD44-234ENST00000531873 ODF3L2Q3SX64 289 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 CRY2Q49AN0 593 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 IGSF11Q5DX21 431 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 DPY19L2P1Q6NXN4 242 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 DCLRE1AQ6PJP8 1040 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 TAOK1Q7L7X3 1001 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 PTF1AQ7RTS3 328 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 SDCCAG8Q86SQ7 713 aaPredicted RBP3.01□□□□□ -1.93
CD44-234ENST00000531873 PIP4P1Q86T03 277 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 PATL1Q86TB9 770 aaKnown RBP3.01□□□□□ -1.93
CD44-234ENST00000531873 ADIPOR2Q86V24 386 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 MCEMP1Q8IX19 187 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 GUF1Q8N442 669 aaKnown RBP3.01□□□□□ -1.93
CD44-234ENST00000531873 SPATA6LQ8N4H0 392 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 TC2NQ8N9U0 490 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 XXYLT1Q8NBI6 393 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 AGBL3Q8NEM8 1001 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 OR8K5Q8NH50 307 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 TMEM163Q8TC26 289 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 LPGAT1Q92604 370 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 VCPIP1Q96JH7 1222 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 FER1L6-AS2Q96M78 137 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 PCGF1Q9BSM1 259 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 CCDC106Q9BWC9 280 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 RSPH9Q9H1X1 276 aaPredicted RBP3.01□□□□□ -1.93
CD44-234ENST00000531873 PPIL3Q9H2H8 161 aaKnown RBP3.01□□□□□ -1.93
CD44-234ENST00000531873 DENND2DQ9H6A0 471 aaPredicted RBP3.01□□□□□ -1.93
CD44-234ENST00000531873 MMP25Q9NPA2 562 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 GPR108Q9NPR9 543 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 HINT3Q9NQE9 182 aaKnown RBP3.01□□□□□ -1.93
CD44-234ENST00000531873 ACSS1Q9NUB1 689 aaPredicted RBP3.01□□□□□ -1.93
CD44-234ENST00000531873 GDE1Q9NZC3 331 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 FLRT1Q9NZU1 646 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 DNAJB4Q9UDY4 337 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 ZNF148Q9UQR1 794 aa3.01□□□□□ -1.93
CD44-234ENST00000531873 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.01□□□□□ -1.93
CD44-234ENST00000531873 SOS1Q07889 1333 aaPredicted RBP3□□□□□ -1.93
CD44-234ENST00000531873 LOC100509620A0A075B734 347 aa3□□□□□ -1.93
CD44-234ENST00000531873 GAGE12JA6NER3 117 aa3□□□□□ -1.93
CD44-234ENST00000531873 KRTAP29-1A8MX34 341 aaPredicted RBP3□□□□□ -1.93
CD44-234ENST00000531873 MAGEB17A8MXT2 336 aa3□□□□□ -1.93
CD44-234ENST00000531873 AKR1B15C9JRZ8 316 aaPredicted RBP3□□□□□ -1.93
CD44-234ENST00000531873 I6L893 689 aaPredicted RBP3□□□□□ -1.93
CD44-234ENST00000531873 MAP2K7O14733 419 aa3□□□□□ -1.93
CD44-234ENST00000531873 WNT9BO14905 357 aa3□□□□□ -1.93
CD44-234ENST00000531873 TIMM23O14925 209 aa3□□□□□ -1.93
CD44-234ENST00000531873 SMAD9O15198 467 aaKnown RBP3□□□□□ -1.93
CD44-234ENST00000531873 SLC7A4O43246 635 aa3□□□□□ -1.93
CD44-234ENST00000531873 RBMXL2O75526 392 aaKnown RBP3□□□□□ -1.93
CD44-234ENST00000531873 CREG1O75629 220 aa3□□□□□ -1.93
CD44-234ENST00000531873 BCL10O95999 233 aa3□□□□□ -1.93
CD44-234ENST00000531873 KLKB1P03952 638 aa3□□□□□ -1.93
CD44-234ENST00000531873 TPOP07202 933 aa3□□□□□ -1.93
CD44-234ENST00000531873 G6PDP11413 515 aa3□□□□□ -1.93
CD44-234ENST00000531873 VDRP11473 427 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms