RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 PDHA1P08559 390 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 GZMAP12544 262 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 ACTR1BP42025 376 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 MMP13P45452 471 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 GPR1P46091 355 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 LIMK2P53671 638 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 ACTR1AP61163 376 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 CLCA4Q14CN2 919 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 XKR5Q6UX68 686 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 TECPR1Q7Z6L1 1165 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 ZNF761Q86XN6 746 aaPredicted RBP18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 SCRN2Q96FV2 425 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 TAAR9Q96RI9 348 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 MCCC1Q96RQ3 725 aaPredicted RBP18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 FUCA2Q9BTY2 467 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 RTN4Q9NQC3 1192 aaKnown RBP18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 KCTD5Q9NXV2 234 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 IL17BQ9UHF5 180 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 DOPEY2Q9Y3R5 2298 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 SCINQ9Y6U3 715 aa18.36■□□□□ 0.53
SSSCA1-206ENST00000531405 IGHV1OR21-1A0A087WYE8 117 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 PSMD11O00231 422 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 TERTO14746 1132 aaKnown RBP18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 ARHGAP6O43182 974 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 RARAP10276 462 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 SKILP12757 684 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 NFKBIAP25963 317 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 PCK1P35558 622 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 GPR3P46089 330 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 CSRP3P50461 194 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 ARMC12Q5T9G4 340 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 MARC1Q5VT66 337 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 LRRC66Q68CR7 880 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 USP45Q70EL2 814 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 MARK2Q7KZI7 788 aaKnown RBP18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 BBS5Q8N3I7 341 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 PIH1D2Q8WWB5 315 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 ART4Q93070 314 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 SCAMP4Q969E2 229 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 NKD1Q969G9 470 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 B3GNT4Q9C0J1 378 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 CDH19Q9H159 772 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 ABCG8Q9H221 673 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 NT5MQ9NPB1 228 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 B3GALT1Q9Y5Z6 326 aa18.35■□□□□ 0.53
SSSCA1-206ENST00000531405 TRBV23OR9-2A0A075B6M9 112 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 ZW10O43264 779 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 TEAD1P28347 426 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 CDH6P55285 790 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 DPTQ07507 201 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 KLHL30Q0D2K2 578 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 CLPPQ16740 277 aaPredicted RBP18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 ATG14Q6ZNE5 492 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 OR4D9Q8NGE8 314 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 NSMCE1Q8WV22 266 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 AP2M1Q96CW1 435 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 SCARF2Q96GP6 870 aaPredicted RBP18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 BTBD6Q96KE9 485 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 OR2M4Q96R27 311 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 AGAP2Q99490 1192 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 SLC12A9Q9BXP2 914 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 PCDH18Q9HCL0 1135 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 OCIAD1Q9NX40 245 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 KCNK4Q9NYG8 393 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 AIPL1Q9NZN9 384 aa18.34■□□□□ 0.53
SSSCA1-206ENST00000531405 SUV39H1O43463 412 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 THRAP10827 490 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 LIFP15018 202 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 CSTF2P33240 577 aaKnown RBP eCLIP18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 PRKCIP41743 596 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 ATP1A2P50993 1020 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 TYRO3Q06418 890 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 TRA2AQ13595 282 aaKnown RBP eCLIP18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 IHHQ14623 411 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 PYCR3Q53H96 274 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 BOLA3Q53S33 107 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 ADAMTSL4Q6UY14 1074 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 IL22RA1Q8N6P7 574 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 AGBL5Q8NDL9 886 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 SEMA3CQ99985 751 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 ZMYND15Q9H091 742 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 MRPL47Q9HD33 250 aaKnown RBP18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 PPIL1Q9Y3C6 166 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 PCDHGA3Q9Y5H0 932 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 PCYT1BQ9Y5K3 369 aaPredicted RBP18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 NBASA2RRP1 2371 aa18.33■□□□□ 0.52
SSSCA1-206ENST00000531405 INPP4BO15327 924 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 FZD6O60353 706 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 EML2O95834 649 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 MYBL1P10243 752 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 SFTPCP11686 197 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 UGT1A3P35503 534 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 PPM1FP49593 454 aaPredicted RBP18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 PTSQ03393 145 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 ITKQ08881 620 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 MMRN1Q13201 1228 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 ANO6Q4KMQ2 910 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 RALGPS1Q5JS13 557 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 FAM129CQ86XR2 697 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms