RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 C10orf142B7Z368 130 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 STMND1H3BQB6 276 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 PES1O00541 588 aaKnown RBP6.29□□□□□ -1.4
PABPC1-220ENST00000522658 RAD51BO15315 384 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 SMAD6O43541 496 aaKnown RBP6.29□□□□□ -1.4
PABPC1-220ENST00000522658 CNTN5O94779 1100 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 PCCBP05166 539 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 HGFP14210 728 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 IGFALSP35858 605 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 EIF4A3P38919 411 aaKnown RBP6.29□□□□□ -1.4
PABPC1-220ENST00000522658 LINC00310P59036 64 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 BPIFB4P59827 614 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 SLC6A3Q01959 620 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 GNA12Q03113 381 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 TLE1Q04724 770 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 PAK1Q13153 545 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 PKP1Q13835 747 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 TAF5Q15542 800 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 ERAP2Q6P179 960 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 BORAQ6PGQ7 559 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 LVRNQ6Q4G3 990 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 ENPP7Q6UWV6 458 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 GBP6Q6ZN66 633 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 SLC26A9Q7LBE3 791 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 TAF8Q7Z7C8 310 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 VASH2Q86V25 355 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 TSPYL5Q86VY4 417 aaPredicted RBP6.29□□□□□ -1.4
PABPC1-220ENST00000522658 Q8N9G6 341 aaPredicted RBP6.29□□□□□ -1.4
PABPC1-220ENST00000522658 TMEM35BQ8NCS4 154 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 OR2AP1Q8NGE2 309 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 OR6K2Q8NGY2 324 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 NELFBQ8WX92 580 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 KIAA1143Q96AT1 154 aaPredicted RBP6.29□□□□□ -1.4
PABPC1-220ENST00000522658 ALG14Q96F25 216 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 HAPLN3Q96S86 360 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 CPXM1Q96SM3 734 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 PSMB7Q99436 277 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 ZSWIM1Q9BR11 485 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 WRAP53Q9BUR4 548 aaKnown RBP6.29□□□□□ -1.4
PABPC1-220ENST00000522658 EDEM3Q9BZQ6 932 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 ADNPQ9H2P0 1102 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 LRRN3Q9H3W5 708 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 GOLPH3LQ9H4A5 285 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 STARD5Q9NSY2 213 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 PIGVQ9NUD9 493 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 ARHGEF38Q9NXL2 777 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 MPP6Q9NZW5 540 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 ANKMY1Q9P2S6 941 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 ITM2BQ9Y287 266 aa6.29□□□□□ -1.4
PABPC1-220ENST00000522658 COL6A6A6NMZ7 2263 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 A0A0D9SEW6 157 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 PRAMEF33A0A0G2JMD5 474 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 FAM237AA0A1B0GTK4 181 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 A0A1W2PQC6 194 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 ZSCAN5CA6NGD5 496 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-220ENST00000522658 RHPN2P1A8MT19 583 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 GOLGA8SH3BPF8 625 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 CACNB4O00305 520 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-220ENST00000522658 NVLO15381 856 aaKnown RBP6.28□□□□□ -1.4
PABPC1-220ENST00000522658 YY2O15391 372 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 PRAMEF10O60809 474 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 RAMP2O60895 175 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 POP4O95707 220 aaKnown RBP6.28□□□□□ -1.4
PABPC1-220ENST00000522658 GSRP00390 522 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 TNFP01375 233 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 INHBBP09529 407 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 GIMD1P0DJR0 217 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 ITIH1P19827 911 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 KELP23276 732 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 NFKBIAP25963 317 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 CCKBRP32239 447 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 MAN1A1P33908 653 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 CCR10P46092 362 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 MAPKAPK2P49137 400 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 RPL34P49207 117 aaKnown RBP6.28□□□□□ -1.4
PABPC1-220ENST00000522658 PEX5P50542 639 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 HK3P52790 923 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 COPB1P53618 953 aaKnown RBP6.28□□□□□ -1.4
PABPC1-220ENST00000522658 PMS1P54277 932 aaKnown RBP6.28□□□□□ -1.4
PABPC1-220ENST00000522658 PFN3P60673 137 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 SRP54P61011 504 aaKnown RBP6.28□□□□□ -1.4
PABPC1-220ENST00000522658 RHOAP61586 193 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 CCL7P80098 99 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 EIF2B5Q13144 721 aaKnown RBP6.28□□□□□ -1.4
PABPC1-220ENST00000522658 PEX6Q13608 980 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 RAPGEF1Q13905 1077 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 NFATC4Q14934 902 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 IRF4Q15306 451 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 EXOC3L4Q17RC7 722 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 TSNAXIP1Q2TAA8 658 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 KLHL40Q2TBA0 621 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 ALFQ53S48 1182 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 LRRC73Q5JTD7 316 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 COLEC12Q5KU26 742 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 ISM2Q6H9L7 571 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 OLFML1Q6UWY5 402 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 GDPD4Q6W3E5 623 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 B3GNT8Q7Z7M8 397 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 PIM3Q86V86 326 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 LILRA2Q8N149 483 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms