RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ADAP00813 363 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 GH1P01241 217 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 IRF1P10914 325 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 PKMP14618 531 aaKnown RBP4.04□□□□□ -1.76
SKP1-209ENST00000522552 ANXA7P20073 488 aaKnown RBP4.04□□□□□ -1.76
SKP1-209ENST00000522552 DNAJB1P25685 340 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 TRHRP34981 398 aaPredicted RBP4.04□□□□□ -1.76
SKP1-209ENST00000522552 PCGF2P35227 344 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 SERPINB6P35237 376 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 IGHMBP2P38935 993 aaKnown RBP4.04□□□□□ -1.76
SKP1-209ENST00000522552 FRKP42685 505 aaPredicted RBP4.04□□□□□ -1.76
SKP1-209ENST00000522552 GABRB2P47870 512 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 BLKP51451 505 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 CLCNKBP51801 687 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 PTENP60484 403 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 ADORA2A-AS1P86434 159 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 SCGB2A2Q13296 93 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 CSRP2Q16527 193 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 CYP2A13Q16696 494 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 ST3GAL2Q16842 350 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 FAM214AQ32MH5 1076 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 CFAP221Q4G0U5 840 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 KCTD21Q4G0X4 260 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 IFI44LQ53G44 452 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 RBM20Q5T481 1227 aaKnown RBP4.04□□□□□ -1.76
SKP1-209ENST00000522552 STRIP1Q5VSL9 837 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 PRAMEF8Q5VWM4 474 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 OR6B2Q6IFH4 312 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 SLC27A1Q6PCB7 646 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 BRAT1Q6PJG6 821 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 ZC3H14Q6PJT7 736 aaKnown RBP4.04□□□□□ -1.76
SKP1-209ENST00000522552 LRIG3Q6UXM1 1119 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 TMEM182Q6ZP80 229 aaPredicted RBP4.04□□□□□ -1.76
SKP1-209ENST00000522552 TDRPQ86YL5 185 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 SPATA2LQ8IUW3 424 aaPredicted RBP4.04□□□□□ -1.76
SKP1-209ENST00000522552 FAM219AQ8IW50 185 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 CCDC83Q8IWF9 413 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 LRRC43Q8N309 656 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 DNAAF1Q8NEP3 725 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 ZNF483Q8TF39 744 aaPredicted RBP4.04□□□□□ -1.76
SKP1-209ENST00000522552 CPA5Q8WXQ8 436 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 TFAP2CQ92754 450 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 MARS2Q96GW9 593 aaKnown RBP4.04□□□□□ -1.76
SKP1-209ENST00000522552 GPHA2Q96T91 129 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 SLC6A15Q9H2J7 730 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 SLCO5A1Q9H2Y9 848 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 CLSTN2Q9H4D0 955 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 YY1AP1Q9H869 796 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 SAP30LQ9HAJ7 183 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 TCF7L2Q9NQB0 619 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 RBM28Q9NW13 759 aaKnown RBP4.04□□□□□ -1.76
SKP1-209ENST00000522552 ZNHIT6Q9NWK9 470 aaKnown RBP4.04□□□□□ -1.76
SKP1-209ENST00000522552 CTTNBP2NLQ9P2B4 639 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 TRAF3IP3Q9Y228 551 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 NUDCQ9Y266 331 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 PLEKHA6Q9Y2H5 1048 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 AAR2Q9Y312 384 aaKnown RBP4.04□□□□□ -1.76
SKP1-209ENST00000522552 REXO2Q9Y3B8 237 aaKnown RBP4.04□□□□□ -1.76
SKP1-209ENST00000522552 U3KQV3 271 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 A0A0B4J293 547 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 TRBV2A0A0J9YWF9 115 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 C2orf92A0A1B0GVN3 265 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ZSCAN5BA6NJL1 495 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 NPIPB11E5RHQ5 1161 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 F8WDY8 70 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 L7N2F9 121 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 E2F3O00716 465 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 PPM1DO15297 605 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ERLIN1O75477 346 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 SUN1O94901 812 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 LCATP04180 440 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 KRT6BP04259 564 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 SERPING1P05155 500 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 CYP2C8P10632 490 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 GNAZP19086 355 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 HNRNPA2B1P22626 353 aaKnown RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 KLRC2P26717 231 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 PSMA5P28066 241 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 CDC25CP30307 473 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 RFC4P35249 363 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 KRT6CP48668 564 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 CLCNKAP51800 687 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 NPEPPSP55786 919 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 RAC3P60763 192 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 UBE2HP62256 183 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 PRKCQQ04759 706 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 GAD2Q05329 585 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 OVGP1Q12889 678 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 VEPH1Q14D04 833 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 PKN1Q16512 942 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 VWC2Q2TAL6 325 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 EDRF1Q3B7T1 1238 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 MCMDC2Q4G0Z9 681 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 EPC2Q52LR7 807 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ATAD3BQ5T9A4 648 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 RNASEH2BQ5TBB1 312 aaKnown RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 SFRP4Q6FHJ7 346 aaPredicted RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 RAET1GQ6H3X3 334 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 TEX38Q6PEX7 206 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 IL20RBQ6UXL0 311 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms