RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 ACTL8Q9H568 366 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 THAP9Q9H5L6 903 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 FAM204AQ9H8W3 233 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 BRD7Q9NPI1 651 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 ST7Q9NRC1 585 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 ZNF451Q9Y4E5 1061 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 PLEKHM1Q9Y4G2 1056 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 ATRQ13535 2644 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 AKAP6Q13023 2319 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 INPP4BO15327 924 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 INSIG1O15503 277 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 SART1O43290 800 aaKnown RBP8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 OIP5O43482 229 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 DPM1O60762 260 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 EML2O95834 649 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 GSRP00390 522 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 CEACAM5P06731 702 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 EPB42P16452 691 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 OR1E1P30953 314 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 PTGER4P35408 488 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 STAT1P42224 750 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 NASPP49321 788 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 LIG3P49916 1009 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 NDST2P52849 883 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 GPLD1P80108 840 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 CDK17Q00537 523 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 CDK18Q07002 472 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 LRMPQ12912 555 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 CHRNA6Q15825 494 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 UGT8Q16880 541 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 SLC30A9Q6PML9 568 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 LEKR1Q6ZMV7 388 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 SLCO4C1Q6ZQN7 724 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 BTLAQ7Z6A9 289 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 ARHGEF2Q92974 986 aaKnown RBP8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 OSBPL1AQ9BXW6 950 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 ATP13A1Q9HD20 1204 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 PCDH12Q9NPG4 1184 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 PIGVQ9NUD9 493 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 ARHGEF38Q9NXL2 777 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 PCDHGB7Q9Y5F8 929 aa8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 FLNAP21333 2647 aaKnown RBP8.85□□□□□ -0.99
TRAPPC9-212ENST00000521944 FN1P02751 2386 aaKnown RBP8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 GOLGA6L3A6NEY3 463 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 POLR2DO15514 142 aaKnown RBP8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 ZW10O43264 779 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 BUB1BO60566 1050 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 LRCH4O75427 683 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 GRAP2O75791 330 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 KIAA0754O94854 1291 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 KRT13P13646 458 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 MAN1A1P33908 653 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 PSMC2P35998 433 aaKnown RBP8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 MARSP56192 900 aaKnown RBP8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 GNA12Q03113 381 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 TYRO3Q06418 890 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 NME3Q13232 169 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 ZNF468Q5VIY5 522 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 ZNF783Q6ZMS7 281 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 ZSWIM9Q86XI8 627 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 ADAMTS17Q8TE56 1095 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 THAP4Q8WY91 577 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 HMCESQ96FZ2 354 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 SMAD5Q99717 465 aaKnown RBP8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 SUDS3Q9H7L9 328 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 CARS2Q9HA77 564 aaKnown RBP8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 ACSS2Q9NR19 701 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 LATS2Q9NRM7 1088 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 FER1L5A0AVI2 2057 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 PIKFYVEQ9Y2I7 2098 aa8.84□□□□□ -0.99
TRAPPC9-212ENST00000521944 TRBV23OR9-2A0A075B6M9 112 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 CACNB4O00305 520 aaPredicted RBP8.83□□□□□ -1
TRAPPC9-212ENST00000521944 E2F3O00716 465 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 CALUO43852 315 aaPredicted RBP8.83□□□□□ -1
TRAPPC9-212ENST00000521944 RECQL5O94762 991 aaPredicted RBP8.83□□□□□ -1
TRAPPC9-212ENST00000521944 TIAF1O95411 115 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 CASP14P31944 242 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 MMP12P39900 470 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 ACADSBP45954 432 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 FASLGP48023 281 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 CXCR3P49682 368 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 RALGDSQ12967 914 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 ADAM9Q13443 819 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 ART3Q13508 389 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 RAPGEF1Q13905 1077 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 UGP2Q16851 508 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 C11orf91Q3C1V1 193 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 ZCWPW2Q504Y3 356 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.83□□□□□ -1
TRAPPC9-212ENST00000521944 FAM199XQ6PEV8 388 aaPredicted RBP8.83□□□□□ -1
TRAPPC9-212ENST00000521944 RHOT1Q8IXI2 618 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 IQCKQ8N0W5 287 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 WDTC1Q8N5D0 677 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 LINC00301Q8NCQ3 95 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 ST6GALNAC3Q8NDV1 305 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 UBE2Q2Q8WVN8 375 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 ITLN2Q8WWU7 325 aaPredicted RBP8.83□□□□□ -1
TRAPPC9-212ENST00000521944 NCSTNQ92542 709 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 C1orf74Q96LT6 269 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 MED15Q96RN5 788 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms