RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 ZCWPW2A0A1B0GU75 182 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 GOLGA8CPA6NN73 597 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 PAK4O96013 591 aaPredicted RBP17.74■□□□□ 0.43
SDC2-205ENST00000520233 PAMP19021 973 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 ARSDP51689 593 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 DPTQ07507 201 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 SETMARQ53H47 684 aaPredicted RBP17.74■□□□□ 0.43
SDC2-205ENST00000520233 SPDYCQ5MJ68 293 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 STEAP4Q687X5 459 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 KIAA0930Q6ICG6 404 aaPredicted RBP17.74■□□□□ 0.43
SDC2-205ENST00000520233 TP53I13Q8NBR0 393 aaPredicted RBP17.74■□□□□ 0.43
SDC2-205ENST00000520233 KLK6Q92876 244 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 ZNF669Q96BR6 464 aaPredicted RBP17.74■□□□□ 0.43
SDC2-205ENST00000520233 BIRC7Q96CA5 298 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 AP2M1Q96CW1 435 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 TBATAQ96M53 351 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 FCRL3Q96P31 734 aaPredicted RBP17.74■□□□□ 0.43
SDC2-205ENST00000520233 LENG8Q96PV6 779 aaPredicted RBP17.74■□□□□ 0.43
SDC2-205ENST00000520233 TRIM56Q9BRZ2 755 aaKnown RBP17.74■□□□□ 0.43
SDC2-205ENST00000520233 IL26Q9NPH9 171 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 CD84Q9UIB8 345 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 FKBPLQ9UIM3 349 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 APPL1Q9UKG1 709 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 DMTF1Q9Y222 760 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 FAM169AQ9Y6X4 670 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 CACNA1IQ9P0X4 2223 aa17.74■□□□□ 0.43
SDC2-205ENST00000520233 CUL9Q8IWT3 2517 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 GLYATL1P3A0A0U1RQE8 302 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 SLC31A1O15431 190 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 HRO43593 1189 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 XIAPP98170 497 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 SRSF5Q13243 272 aaKnown RBP17.73■□□□□ 0.43
SDC2-205ENST00000520233 CRYMQ14894 314 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 LRRC14Q15048 493 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 WSCD2Q2TBF2 565 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 HENMT1Q5T8I9 393 aaKnown RBP17.73■□□□□ 0.43
SDC2-205ENST00000520233 UNC5AQ6ZN44 842 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 LPCAT2Q7L5N7 544 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 PALM2Q8IXS6 379 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 TRAM1L1Q8N609 369 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.73■□□□□ 0.43
SDC2-205ENST00000520233 DENND6BQ8NEG7 585 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 SCAMP4Q969E2 229 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 HDAC10Q969S8 669 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 CENPTQ96BT3 561 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 CFAP36Q96G28 342 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 C9orf72Q96LT7 481 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 KLF6Q99612 283 aaPredicted RBP17.73■□□□□ 0.43
SDC2-205ENST00000520233 RIOK2Q9BVS4 552 aaKnown RBP17.73■□□□□ 0.43
SDC2-205ENST00000520233 EBF2Q9HAK2 575 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 PLAC1Q9HBJ0 212 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 EML5Q05BV3 1969 aa17.73■□□□□ 0.43
SDC2-205ENST00000520233 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 A0A1W2PPC4 97 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 CCL22O00626 93 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 LILRB5O75023 590 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 GSTA2P09210 222 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 TSHRP16473 764 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 HNRNPA2B1P22626 353 aaKnown RBP17.72■□□□□ 0.43
SDC2-205ENST00000520233 PRAMEP78395 509 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 PEX6Q13608 980 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 FRG1Q14331 258 aaKnown RBP17.72■□□□□ 0.43
SDC2-205ENST00000520233 LONRF1Q17RB8 773 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 ALS2CLQ60I27 953 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 SLC41A1Q8IVJ1 513 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 TMEFF1Q8IYR6 380 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 DEFB119Q8N690 84 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 SGSM3Q96HU1 749 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 HSPA12BQ96MM6 686 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 TTC25Q96NG3 672 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 PRRX2Q99811 253 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 ZSCAN5AQ9BUG6 496 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 TXLNGYQ9BZA5 131 aa17.72■□□□□ 0.43
SDC2-205ENST00000520233 CDC42EP4Q9H3Q1 356 aaKnown RBP17.72■□□□□ 0.43
SDC2-205ENST00000520233 SUDS3Q9H7L9 328 aaPredicted RBP17.72■□□□□ 0.43
SDC2-205ENST00000520233 CCDC162PA2VCL2 907 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 MEI4A8MW99 385 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 PRAMEF26H0Y7S4 382 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 GAPDHSO14556 408 aaPredicted RBP17.71■□□□□ 0.43
SDC2-205ENST00000520233 SRP72O76094 671 aaKnown RBP17.71■□□□□ 0.43
SDC2-205ENST00000520233 VAPBO95292 243 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 PYGLP06737 847 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 CD27P26842 260 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 ARNTP27540 789 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 TEAD1P28347 426 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 AKT2P31751 481 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 MC4RP32245 332 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 ARCN1P48444 511 aaKnown RBP17.71■□□□□ 0.43
SDC2-205ENST00000520233 IRF4Q15306 451 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 CHRNA6Q15825 494 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 KYNUQ16719 465 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 PLK5Q496M5 336 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 PMS2CLQ68D20 193 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 PDPK2PQ6A1A2 396 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 PNCKQ6P2M8 343 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 EMBQ6PCB8 327 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 AFTPHQ6ULP2 937 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 FAM151BQ6UXP7 276 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 OR6P1Q8NGX9 317 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 GSDMBQ8TAX9 411 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms