RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 JMJD7P0C870 316 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ZNF28P17035 718 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 XPAP23025 273 aaPredicted RBP8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 HTR1BP28222 390 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 SERPINA4P29622 427 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 VIPR1P32241 457 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CSRP3P50461 194 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 SLC25A11Q02978 314 aaKnown RBP8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 DPYSL2Q16555 572 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PYCR3Q53H96 274 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 LRRC66Q68CR7 880 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ANKS6Q68DC2 871 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 HIST2H2BCQ6DN03 193 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ERAP2Q6P179 960 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 DCUN1D2Q6PH85 259 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 DOK6Q6PKX4 331 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 MICALCLQ6ZW33 695 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 MARK2Q7KZI7 788 aaKnown RBP8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ARHGAP22Q7Z5H3 698 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 TEX26Q8N6G2 289 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 NEK11Q8NG66 645 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 SLC37A2Q8TED4 501 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 SCG3Q8WXD2 468 aaKnown RBP8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ART4Q93070 314 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 NUS1Q96E22 293 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CCDC97Q96F63 343 aaPredicted RBP8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 SCRN2Q96FV2 425 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 TMEM74Q96NL1 305 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 NUDCD1Q96RS6 583 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CINPQ9BW66 212 aaPredicted RBP8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 C1QTNF7Q9BXJ2 289 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 STRADBQ9C0K7 418 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 EPN3Q9H201 632 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 AKIRIN1Q9H9L7 192 aaPredicted RBP8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PCDH18Q9HCL0 1135 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 GEMIN8Q9NWZ8 242 aaKnown RBP8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 TRNAU1APQ9NX07 287 aaKnown RBP8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 OGFRQ9NZT2 677 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 TBC1D29Q9UFV1 150 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PILRAQ9UKJ1 303 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 NENFQ9UMX5 172 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PCDHGA3Q9Y5H0 932 aa8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 MRPS18BQ9Y676 258 aaKnown RBP8.24□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PRR19A6NJB7 356 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 IVLP07476 585 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 NR1D1P20393 614 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 OAS2P29728 719 aaKnown RBP8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PRKCIP41743 596 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 STC1P52823 247 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 AIF1P55008 147 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 TAS2R40P59535 323 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 AP1S1P61966 158 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 DSC2Q02487 901 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 TLE1Q04724 770 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 DPTQ07507 201 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ARHGEF7Q14155 803 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 KHDC1Q4VXA5 237 aaKnown RBP8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 MANEAQ5SRI9 462 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 TMCO4Q5TGY1 634 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ADAMTSL4Q6UY14 1074 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PIM3Q86V86 326 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 SFRP1Q8N474 314 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 AOPEPQ8N6M6 819 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PQLC3Q8N755 202 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 OR6C4Q8NGE1 309 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 FAM71BQ8TC56 605 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PDCD6IPQ8WUM4 868 aaKnown RBP8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 RIOK2Q9BVS4 552 aaKnown RBP8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ISCUQ9H1K1 167 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 SP110Q9HB58 689 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PARVAQ9NVD7 372 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 EVA1BQ9NVM1 165 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 AIPL1Q9NZN9 384 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 TMEM63CQ9P1W3 806 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CNOT8Q9UFF9 292 aaKnown RBP8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 SLC23A2Q9UGH3 650 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 SEPT3Q9UH03 358 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 SLC30A1Q9Y6M5 507 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 AKAP9Q99996 3911 aa8.23□□□□□ -1.09
SCARNA20.3-201ENST00000516913 DOPEY1Q5JWR5 2465 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 A0A0J9YYE9 177 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 A8MU76 341 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 TMX2-CTNND1H3BSU7 103 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 INPP4BO15327 924 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 MFSD11O43934 449 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CLDN7O95471 211 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CPP00450 1065 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 TRBC1P01850 177 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PDGFAP04085 211 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 RNF224P0DH78 156 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 FERP16591 822 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 HTR7P34969 479 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ANP32AP39687 249 aaKnown RBP8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PBX1P40424 430 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ACTR1BP42025 376 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ACTR1AP61163 376 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 MYL5Q02045 173 aa8.22□□□□□ -1.09
SCARNA20.3-201ENST00000516913 RFTN1Q14699 578 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms