RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 TBC1D3Q8IZP1 549 aaPredicted RBP12.5□□□□□ -0.41
PDPN-210ENST00000513143 GPR26Q8NDV2 337 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 RLN3Q8WXF3 142 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 HDAC10Q969S8 669 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 DTD2Q96FN9 168 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 TOE1Q96GM8 510 aaKnown RBP12.5□□□□□ -0.41
PDPN-210ENST00000513143 SGSM3Q96HU1 749 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 PLEKHG4BQ96PX9 1271 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 C1QTNF2Q9BXJ5 285 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 COL25A1Q9BXS0 654 aaPredicted RBP12.5□□□□□ -0.41
PDPN-210ENST00000513143 FUT8Q9BYC5 575 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 CDH19Q9H159 772 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 EPB41L4BQ9H329 900 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 RAD18Q9NS91 495 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 ARGLU1Q9NWB6 273 aaPredicted RBP12.5□□□□□ -0.41
PDPN-210ENST00000513143 FKBPLQ9UIM3 349 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 PLXNB3Q9ULL4 1909 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 A0A1W2PQU0 124 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 CCL22O00626 93 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 GAPDHSO14556 408 aaPredicted RBP12.49□□□□□ -0.41
PDPN-210ENST00000513143 LZTS3O60299 673 aaPredicted RBP12.49□□□□□ -0.41
PDPN-210ENST00000513143 RECQL5O94762 991 aaPredicted RBP12.49□□□□□ -0.41
PDPN-210ENST00000513143 VAPBO95292 243 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 ACSL3O95573 720 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 ABHD2P08910 425 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 SPAM1P38567 509 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 PRAMEP78395 509 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 XIAPP98170 497 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 DMWDQ09019 674 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 PEX6Q13608 980 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 UAP1Q16222 522 aaPredicted RBP12.49□□□□□ -0.41
PDPN-210ENST00000513143 ZNF284Q2VY69 593 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 USP39Q53GS9 565 aaKnown RBP12.49□□□□□ -0.41
PDPN-210ENST00000513143 SEL1L3Q68CR1 1132 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 PDPK2PQ6A1A2 396 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 ZNF449Q6P9G9 518 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 TRMT10BQ6PF06 316 aaKnown RBP12.49□□□□□ -0.41
PDPN-210ENST00000513143 FBXO38Q6PIJ6 1188 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 TSSK4Q6SA08 328 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 CAPN12Q6ZSI9 719 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 ZNF765Q7L2R6 523 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 NLRP8Q86W28 1048 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 TRIM69Q86WT6 500 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 DTX3LQ8TDB6 740 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 UBLCP1Q8WVY7 318 aaPredicted RBP12.49□□□□□ -0.41
PDPN-210ENST00000513143 ASB12Q8WXK4 309 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 CERS2Q96G23 380 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 ABCG8Q9H221 673 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 FAM83DQ9H4H8 585 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 SUDS3Q9H7L9 328 aaPredicted RBP12.49□□□□□ -0.41
PDPN-210ENST00000513143 VPS37BQ9H9H4 285 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 IL26Q9NPH9 171 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 C11orf16Q9NQ32 467 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 KCTD5Q9NXV2 234 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 APPL1Q9UKG1 709 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 COQ6Q9Y2Z9 468 aa12.49□□□□□ -0.41
PDPN-210ENST00000513143 TCRBV9S1A1TA0A576 114 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 CCDC162PA2VCL2 907 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 PRR23AA6NEV1 266 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 FAM47DPA6NHR8 397 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 GOLGA8CPA6NN73 597 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 LATO43561 262 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 SRP72O76094 671 aaKnown RBP12.48□□□□□ -0.41
PDPN-210ENST00000513143 GOT2P00505 430 aaKnown RBP12.48□□□□□ -0.41
PDPN-210ENST00000513143 C1QAP02745 245 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 STX2P32856 288 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 PHBP35232 272 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 HSD17B3P37058 310 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 CCR5P51681 352 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 PPP2CBP62714 309 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 PPP2CAP67775 309 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 CSTF1Q05048 431 aaKnown RBP12.48□□□□□ -0.41
PDPN-210ENST00000513143 DPTQ07507 201 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 FGL2Q14314 439 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 SLC29A2Q14542 456 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 HENMT1Q5T8I9 393 aaKnown RBP12.48□□□□□ -0.41
PDPN-210ENST00000513143 AFTPHQ6ULP2 937 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 WDR5BQ86VZ2 330 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 UNC5BQ8IZJ1 945 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 FAM160A2Q8N612 972 aaPredicted RBP12.48□□□□□ -0.41
PDPN-210ENST00000513143 FRMD1Q8N878 549 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 OR6P1Q8NGX9 317 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 OR4L1Q8NH43 312 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 FBF1Q8TES7 1133 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 SCAMP4Q969E2 229 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 NUS1Q96E22 293 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 SPACA7Q96KW9 195 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 SLC17A9Q9BYT1 436 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 OCEL1Q9H607 264 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 ARFGAP3Q9NP61 516 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 C20orf96Q9NUD7 363 aaPredicted RBP12.48□□□□□ -0.41
PDPN-210ENST00000513143 IL1RAPL1Q9NZN1 696 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 CD84Q9UIB8 345 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 MBD1Q9UIS9 605 aaPredicted RBP12.48□□□□□ -0.41
PDPN-210ENST00000513143 RABGEF1Q9UJ41 708 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 FBXO4Q9UKT5 387 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 ABCA7Q8IZY2 2146 aa12.48□□□□□ -0.41
PDPN-210ENST00000513143 A0A087WUV0 522 aaPredicted RBP12.47□□□□□ -0.41
PDPN-210ENST00000513143 GLYATL1P3A0A0U1RQE8 302 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 OR51F1A6NGY5 319 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms