RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 SYT12Q8IV01 421 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 ASZ1Q8WWH4 475 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 ZNF358Q9NW07 568 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 CCDC162PA2VCL2 907 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 HNRNPRO43390 633 aaKnown RBP13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 CDK14O94921 469 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 LINC00032P0C843 101 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 GJA1P17302 382 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 OGNP20774 298 aaKnown RBP13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 IVDP26440 423 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 OLIG2Q13516 323 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 CYP2A13Q16696 494 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 C14orf80Q86SX3 495 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 FAM83DQ9H4H8 585 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 CERS4Q9HA82 394 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 ZFP14Q9HCL3 533 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 KCTD5Q9NXV2 234 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 KCNE2Q9Y6J6 123 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 OAZ2O95190 189 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 ESR1P03372 595 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 PSMC3P17980 439 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 ATP6V1B2P21281 511 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 ALDH9A1P49189 494 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 GSCP56915 257 aaPredicted RBP13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 TAF1AQ15573 450 aaPredicted RBP13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 FAM98BQ52LJ0 330 aaKnown RBP13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 IGDCC3Q8IVU1 814 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 ZDHHC14Q8IZN3 488 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 OR13C4Q8NGS5 318 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 ZSCAN18Q8TBC5 510 aaPredicted RBP13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 DIS3LQ8TF46 1054 aaKnown RBP13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 C1orf74Q96LT6 269 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 ABCB8Q9NUT2 735 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 RPL26L1Q9UNX3 145 aaKnown RBP13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 SPACA6W5XKT8 324 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 THSD7AQ9UPZ6 1657 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 DOCK2Q92608 1830 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 PITPNM1O00562 1244 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 ECHS1P30084 290 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 PTGER3P43115 390 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 ANXA11P50995 505 aaKnown RBP13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 THOP1P52888 689 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 FPGSQ05932 587 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 SLC10A2Q12908 348 aaPredicted RBP13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 ATAT1Q5SQI0 421 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 PSRC1Q6PGN9 363 aaPredicted RBP13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 P3H2Q8IVL5 708 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 FIG4Q92562 907 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 CDKN2AIPNLQ96HQ2 116 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 TSGA13Q96PP4 275 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 YIPF2Q9BWQ6 316 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 LRMDAQ9H2I8 198 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 C15orf41Q9Y2V0 281 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 ARAP2Q8WZ64 1704 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 CITO14578 2027 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 TTC24A2A3L6 582 aaPredicted RBP13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 CSKP41240 450 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 MAPKAPK3Q16644 382 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 VWA5B1Q5TIE3 1220 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 ZNF621Q6ZSS3 439 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 CAMK1DQ8IU85 385 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 LEF1Q9UJU2 399 aaPredicted RBP13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 GJD2Q9UKL4 321 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 PADI4Q9UM07 663 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 MTF2Q9Y483 593 aaPredicted RBP13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 ARL5AQ9Y689 179 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 ATXN2Q99700 1313 aaKnown RBP13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 SNAP91O60641 907 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 DEAF1O75398 565 aaPredicted RBP13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 TGM3Q08188 693 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 VAC14Q08AM6 782 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 PRKD1Q15139 912 aaPredicted RBP13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 NET1Q7Z628 596 aaPredicted RBP13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 DLG3Q92796 817 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 ZNF317Q96PQ6 595 aaPredicted RBP13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 BRD9Q9H8M2 597 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 NENFQ9UMX5 172 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 LRCH1Q9Y2L9 728 aa13.07□□□□□ -0.32
PCDHA4-202ENST00000512229 NPEPPSL1A6NEC2 478 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 GSC2O15499 205 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 SIN3BO75182 1162 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 SCAPQ12770 1279 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 SERINC3Q13530 473 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 DMC1Q14565 340 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 ALFQ53S48 1182 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 UBE2R2Q712K3 238 aaPredicted RBP13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 GET4Q7L5D6 327 aaPredicted RBP13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 ZNF781Q8N8C0 355 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 OR9Q1Q8NGQ5 310 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 DNAJB14Q8TBM8 379 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 GDPD5Q8WTR4 605 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 CYP2S1Q96SQ9 504 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 HEPHQ9BQS7 1158 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 BDH2Q9BUT1 245 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 TMEM248Q9NWD8 314 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 DUS2Q9NX74 493 aaKnown RBP13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 FAM53CQ9NYF3 392 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 LIMD1Q9UGP4 676 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 SLC12A4Q9UP95 1085 aa13.06□□□□□ -0.32
PCDHA4-202ENST00000512229 INSL5Q9Y5Q6 135 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms